RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SPACA1Q9HBV2 294 aa9.45□□□□□ -0.9
SND1-212ENST00000485871 ZNF701Q9NV72 531 aaPredicted RBP9.45□□□□□ -0.9
SND1-212ENST00000485871 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
SND1-212ENST00000485871 AK3Q9UIJ7 227 aa9.45□□□□□ -0.9
SND1-212ENST00000485871 ABCA2Q9BZC7 2435 aa9.45□□□□□ -0.9
SND1-212ENST00000485871 USF3Q68DE3 2245 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 M0QYG6 137 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SIRPB1O00241 398 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SH2D1BO14796 132 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 DEGS1O15121 323 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 FCN3O75636 299 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 ZNF205O95201 554 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
SND1-212ENST00000485871 IGHV2-70P01814 119 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 OR4E1P0C645 316 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 VSIG10L2P0DP72 767 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 IRF2P14316 349 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 ZNF44P15621 663 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PAX1P15863 534 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 CXCL3P19876 107 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 S100A1P23297 94 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SSTR2P30874 369 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PRDX2P32119 198 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 EFNA4P52798 201 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 COL10A1Q03692 680 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SURF2Q15527 256 aaPredicted RBP9.44□□□□□ -0.9
SND1-212ENST00000485871 HFEQ30201 348 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 ATPAF1Q5TC12 328 aaPredicted RBP9.44□□□□□ -0.9
SND1-212ENST00000485871 LIN54Q6MZP7 749 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 C17orf107Q6ZR85 190 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SLC25A42Q86VD7 318 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 HOGA1Q86XE5 327 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 OR2AK2Q8NG84 335 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 OR2T35Q8NGX2 323 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PLPPR1Q8TBJ4 325 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 DYRK2Q92630 601 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 NRGNQ92686 78 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SDSLQ96GA7 329 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 CCL19Q99731 98 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 SLC6A7Q99884 636 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
SND1-212ENST00000485871 DPCDQ9BVM2 203 aaPredicted RBP9.44□□□□□ -0.9
SND1-212ENST00000485871 SHARPINQ9H0F6 387 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 BEX1Q9HBH7 125 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 OR14J1Q9UGF5 321 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 MGAT4AQ9UM21 535 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 PPIAL4AQ9Y536 164 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 HSPB11Q9Y547 144 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 MAB21L2Q9Y586 359 aa9.44□□□□□ -0.9
SND1-212ENST00000485871 A0A1B0GW55 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 CEACAM18A8MTB9 384 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 NAPSAO96009 420 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 CSN2P05814 226 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L2P0CJ85 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L3P0CJ86 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L4P0CJ87 422 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L5P0CJ88 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L6P0CJ89 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L7P0CJ90 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 SELLP14151 372 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DAOP14920 347 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DTYMKP23919 212 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 HRH1P35367 487 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 OR3A1P47881 315 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 PAX5Q02548 391 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 FGL1Q08830 312 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 SCGB2B2Q4G0G5 96 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4L9Q6RFH8 374 aaPredicted RBP9.43□□□□□ -0.9
SND1-212ENST00000485871 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
SND1-212ENST00000485871 OR4S1Q8NGB4 309 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DNTTIP1Q9H147 329 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 TMEM165Q9HC07 324 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DNAJB11Q9UBS4 358 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 DUX4Q9UBX2 424 aa9.43□□□□□ -0.9
SND1-212ENST00000485871 SPG11Q96JI7 2443 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 TRBV6-6A0A0A6YYG2 114 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 TRAV38-1A0A0B4J264 116 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 HMSDA8MTL9 139 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 MCRIP1C9JLW8 97 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 HSPB6O14558 160 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 SIGLEC5O15389 551 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 GYPAP02724 150 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
SND1-212ENST00000485871 HLA-GP17693 338 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 FPR2P25090 351 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 OR3A3P47888 321 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 GRK1Q15835 563 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 MICBQ29980 383 aa9.42□□□□□ -0.9
SND1-212ENST00000485871 PAN3Q58A45 887 aaKnown RBP9.42□□□□□ -0.9
SND1-212ENST00000485871 LAMTOR1Q6IAA8 161 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms