RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 CLIC3O95833 236 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 IGKV1D-33P01593 117 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 IGKV1-33P01594 117 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 CSTBP04080 98 aaKnown RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 CD2P06729 351 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 TMEM11P17152 192 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 SERPINA2P20848 420 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 ZNF93P35789 620 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 REG1BP48304 166 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 EGFEM1PQ0D2K5 195 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 MADCAM1Q13477 382 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 ATAD3CQ5T2N8 411 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 DDI2Q5TDH0 399 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 FAM53AQ6NSI3 398 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 RPL22L1Q6P5R6 122 aaKnown RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 ASCL4Q6XD76 172 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 MOB3BQ86TA1 216 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 OSR2Q8N2R0 312 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 PQLC1Q8N2U9 271 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 OR13C5Q8NGS8 318 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 OR10X1Q8NGY0 326 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 TMEM106AQ96A25 262 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 RBMXL1Q96E39 390 aaKnown RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 CPNE2Q96FN4 548 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 METTL9Q9H1A3 318 aa8.37□□□□□ -1.07
HMGN1-215ENST00000485550 FGF20Q9NP95 211 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-215ENST00000485550 IGHV3-43A0A0B4J1X8 118 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 A0A1W2PPI3 338 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 M0QZK8 103 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 LALBAP00709 142 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 IGHV3-43DP0DP04 118 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 PPP3R1P63098 170 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 TMPRSS11AQ6ZMR5 421 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 C18orf65Q6ZTR6 163 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 C10orf67Q8IYJ2 551 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 ZFP41Q8N8Y5 198 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 ZNF555Q8NEP9 628 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 Q8NFD4 153 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 OR52N1Q8NH53 320 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 NEK7Q8TDX7 302 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 ARL11Q969Q4 196 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 S100A13Q99584 98 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 NCOR1P1Q9H4R4 102 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 LINC00574Q9H8X3 128 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 TMEM138Q9NPI0 162 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 PCDHB16Q9NRJ7 776 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 BABAM2Q9NXR7 383 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 CLEC2DQ9UHP7 191 aa8.36□□□□□ -1.07
HMGN1-215ENST00000485550 A0A1W2PPK0 400 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 MAGEA13PA6NCF6 341 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 LINC01548A6NM66 108 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 NCBP2LA6PVI3 153 aaKnown RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 CCRL2O00421 344 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 HSD17B6O14756 317 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 DUS4LO95620 317 aaKnown RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 GZMHP20718 246 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 DCKP27707 260 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 BDKRB2P30411 391 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 KCNJ3P48549 501 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 RAB7AP51149 207 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 RBM11P57052 281 aaKnown RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 LRRC36Q1X8D7 754 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 SLC22A6Q4U2R8 563 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 CASC10Q5T4H9 136 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 GHSRQ92847 366 aa8.35□□□□□ -1.07
HMGN1-215ENST00000485550 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 SMPD3Q9NY59 655 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-215ENST00000485550 IGHV1-3A0A0C4DH29 117 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 PNMA8CA0A1B0GUJ8 204 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 TMEM30CPA0ZSE6 113 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 C15orf65H3BRN8 121 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 SDCBPO00560 298 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-215ENST00000485550 OGG1O15527 345 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 GAPDHP04406 335 aaKnown RBP8.34□□□□□ -1.07
HMGN1-215ENST00000485550 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-215ENST00000485550 RPL23AP62750 156 aaKnown RBP8.34□□□□□ -1.07
HMGN1-215ENST00000485550 RIPK1Q13546 671 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 DOC2BQ14184 412 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 ETV3LQ6ZN32 361 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 OR2W3Q7Z3T1 314 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 SLC35E3Q7Z769 313 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 OR8H3Q8N146 312 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 OR10A7Q8NGE5 316 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 CHPT1Q8WUD6 406 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 CYGBQ8WWM9 190 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 DPF1Q92782 380 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 MUL1Q969V5 352 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 SMIM19Q96E16 107 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 CYYR1Q96J86 154 aa8.34□□□□□ -1.07
HMGN1-215ENST00000485550 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms