RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ORAI1Q96D31 301 aa15.15■□□□□ 0.02
COL27A1-205ENST00000485397 MCRIP2Q9BUT9 160 aaKnown RBP15.15■□□□□ 0.02
COL27A1-205ENST00000485397 METTL9Q9H1A3 318 aa15.15■□□□□ 0.02
COL27A1-205ENST00000485397 RPL36Q9Y3U8 105 aaKnown RBP15.15■□□□□ 0.02
COL27A1-205ENST00000485397 KMT2CQ8NEZ4 4911 aaKnown RBP15.15■□□□□ 0.02
COL27A1-205ENST00000485397 LOC100130705A0A1B0GUX0 176 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 TMEM30CPA0ZSE6 113 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
COL27A1-205ENST00000485397 C15orf65H3BRN8 121 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 GEMIN2O14893 280 aaKnown RBP15.14■□□□□ 0.01
COL27A1-205ENST00000485397 CD2P06729 351 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 GZMHP20718 246 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 RBM11P57052 281 aaKnown RBP15.14■□□□□ 0.01
COL27A1-205ENST00000485397 DDI2Q5TDH0 399 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 ZFP1Q6P2D0 407 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 ZNF695Q8IW36 515 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 COMMD1Q8N668 190 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 Q8N6K4 173 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 OR52N1Q8NH53 320 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 ARL11Q969Q4 196 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 B9D2Q9BPU9 175 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 IFT22Q9H7X7 185 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.14■□□□□ 0.011e-5■□□□□ 9.5
COL27A1-205ENST00000485397 IL36GQ9NZH8 169 aa15.14■□□□□ 0.01
COL27A1-205ENST00000485397 IGHV3-43A0A0B4J1X8 118 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 A0A1W2PP11 408 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 SDCBPO00560 298 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 CSTBP04080 98 aaKnown RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 IGHV3-43DP0DP04 118 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 SERPINA2P20848 420 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 SLC6A1P30531 599 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 ZNF93P35789 620 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 GPR12P47775 334 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 KLHL22Q53GT1 634 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 NHLRC3Q5JS37 347 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 ATAD3CQ5T2N8 411 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 RPL22L1Q6P5R6 122 aaKnown RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 LCNL1Q6ZST4 164 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 TGIF2LXQ8IUE1 241 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 IZUMO1Q8IYV9 350 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 LINC00311Q8N616 119 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 RBMXL1Q96E39 390 aaKnown RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 RAX2Q96IS3 184 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 C9orf16Q9BUW7 83 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 TMEM138Q9NPI0 162 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 GFOD1Q9NXC2 390 aa15.13■□□□□ 0.01
COL27A1-205ENST00000485397 SIRT4Q9Y6E7 314 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-205ENST00000485397 RPLP1P05386 114 aaKnown RBP15.12■□□□□ 0.01
COL27A1-205ENST00000485397 VSIG8P0DPA2 414 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 BDKRB2P30411 391 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 ETV1P50549 477 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 RAB25P57735 213 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 SMN1Q16637 294 aaKnown RBP15.12■□□□□ 0.01
COL27A1-205ENST00000485397 OR2G6Q5TZ20 316 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 TEX38Q6PEX7 206 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 Q8N9W7 124 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 OR52M1Q8NGK5 317 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 OR13C5Q8NGS8 318 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 OR2T10Q8NGZ9 312 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 ABCG5Q9H222 651 aa15.12■□□□□ 0.01
COL27A1-205ENST00000485397 FGF20Q9NP95 211 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-205ENST00000485397 ZNF736B4DX44 427 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-205ENST00000485397 H0YHG0 523 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 CCL24O00175 119 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 AP4M1O00189 453 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 SLC31A2O15432 143 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 MT-ND4P03905 459 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 PPP3R1P63098 170 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 PNLIPRP3Q17RR3 467 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 DEFB136Q30KP8 78 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 CCDC58Q4VC31 144 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 UNQ9370/PRO34162Q6UXP9 181 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 NEK7Q8TDX7 302 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 TFAP2CQ92754 450 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 ST6GALNAC6Q969X2 333 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 S100A13Q99584 98 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 DCLRE1BQ9H816 532 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 PLSCR3Q9NRY6 295 aa15.11■□□□□ 0.01
COL27A1-205ENST00000485397 LIN7CQ9NUP9 197 aaKnown RBP15.11■□□□□ 0.01
COL27A1-205ENST00000485397 ORC5O43913 435 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 WBP4O75554 376 aaKnown RBP15.1■□□□□ 0.01
COL27A1-205ENST00000485397 DGCR2P98153 550 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 MPV17LQ2QL34 196 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 SLC22A6Q4U2R8 563 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 LINC00596Q86U02 117 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 C8orf31Q8N9H6 132 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 TMEM104Q8NE00 496 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 RTN4IP1Q8WWV3 396 aaPredicted RBP15.1■□□□□ 0.01
COL27A1-205ENST00000485397 NBEAL2Q6ZNJ1 2754 aa15.1■□□□□ 0.01
COL27A1-205ENST00000485397 MAGEA13PA6NCF6 341 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 OGG1O15527 345 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 LALBAP00709 142 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 IL3RAP26951 378 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 CD1BP29016 333 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 GPR50Q13585 617 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 ZNF497Q6ZNH5 498 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 WWC2-AS2Q96NR7 200 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 S1PR3Q99500 378 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 ZNF184Q99676 751 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms