RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MARCOQ9UEW3 520 aaPredicted RBP2.05□□□□□ -2.08
SMC4-215ENST00000484799 TBL2Q9Y4P3 447 aaKnown RBP2.05□□□□□ -2.08
SMC4-215ENST00000484799 YEATS2Q9ULM3 1422 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 ARAP3Q8WWN8 1544 aa2.05□□□□□ -2.08
SMC4-215ENST00000484799 DAPL1A0PJW8 107 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 C8orf87E5RJ46 101 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 ADGRL1O94910 1474 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 FSTL3O95633 263 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 ATP6V1G2O95670 118 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 GDI2P50395 445 aaKnown RBP2.04□□□□□ -2.08
SMC4-215ENST00000484799 MP68P56378 58 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 DNAL1Q4LDG9 190 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 TMEM69Q5SWH9 247 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 CCDC122Q5T0U0 273 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 RPRD2Q5VT52 1461 aaKnown RBP2.04□□□□□ -2.08
SMC4-215ENST00000484799 DNM1P34Q6PK57 102 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 FAM131AQ6UXB0 335 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 SGPP2Q8IWX5 399 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 CPNE9Q8IYJ1 553 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 TMEM251Q8N6I4 163 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 ZFP62Q8NB50 900 aaPredicted RBP2.04□□□□□ -2.08
SMC4-215ENST00000484799 DNAJB3Q8WWF6 145 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 TAMM41Q96BW9 452 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 FXYD5Q96DB9 178 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 MAP3K5Q99683 1374 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 SEC22CQ9BRL7 303 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 SHANK2-AS3Q9BTD1 123 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 SLC19A3Q9BZV2 496 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 TXNIPQ9H3M7 391 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 PLEKHJ1Q9NW61 149 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 TMEM216Q9P0N5 145 aa2.04□□□□□ -2.08
SMC4-215ENST00000484799 THADAQ6YHU6 1953 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 PTPRKQ15262 1439 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 RIMS2Q9UQ26 1411 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 K7EM74 188 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 M0QYV0 167 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 ATP8B1O43520 1251 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 AHSA1O95433 338 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 GPR75O95800 540 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 APOEP02649 317 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 PFN1P07737 140 aaKnown RBP2.03□□□□□ -2.08
SMC4-215ENST00000484799 KRT7P08729 469 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 CD99P14209 185 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 CELP19835 753 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 AGTR1P30556 359 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 CD79BP40259 229 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 PSMD7P51665 324 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 FLI1Q01543 452 aaPredicted RBP2.03□□□□□ -2.08
SMC4-215ENST00000484799 LRRC26Q2I0M4 334 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 ZCWPW2Q504Y3 356 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 PTRHD1Q6GMV3 140 aaKnown RBP2.03□□□□□ -2.08
SMC4-215ENST00000484799 SCGB1D4Q6XE38 83 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 FER1L6-AS1Q8NA97 138 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 OR2K2Q8NGT1 345 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 CMBLQ96DG6 245 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 SMIM19Q96E16 107 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 TRIB3Q96RU7 358 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 DHRS9Q9BPW9 319 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 BCL2L14Q9BZR8 327 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 FBXL15Q9H469 300 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 NAGKQ9UJ70 344 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 TP53TG1Q9Y2A0 90 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 MTCH2Q9Y6C9 303 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 PLXNB3Q9ULL4 1909 aa2.03□□□□□ -2.08
SMC4-215ENST00000484799 YLPM1P49750 1951 aaKnown RBP2.02□□□□□ -2.09
SMC4-215ENST00000484799 H3BSA7 217 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 ISLRO14498 428 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 SLC16A4O15374 487 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 COCHO43405 550 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 SSNA1O43805 119 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 ADAP1O75689 374 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 CRTAPO75718 401 aaPredicted RBP2.02□□□□□ -2.09
SMC4-215ENST00000484799 PSMG1O95456 288 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 PDYNP01213 254 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 IGHG2P01859 326 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 GADD45AP24522 165 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 TGFBR1P36897 503 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 RAB2AP61019 212 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 CASP8Q14790 479 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 HLA-DRB5Q30154 266 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 PDZD11Q5EBL8 140 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 HENMT1Q5T8I9 393 aaKnown RBP2.02□□□□□ -2.09
SMC4-215ENST00000484799 ELP2Q6IA86 826 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 Q6ZQT7 251 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 PAGE2Q7Z2X7 111 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 VN1R4Q7Z5H5 301 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 ZBTB8OSQ8IWT0 167 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 ZFP82Q8N141 532 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 Q8N402 240 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 ZNF680Q8NEM1 530 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 BPIFB6Q8NFQ5 453 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 OR5D18Q8NGL1 313 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 OR51H1Q8NH63 302 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 SPPL2BQ8TCT7 592 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 RBPMSQ93062 196 aaKnown RBP2.02□□□□□ -2.09
SMC4-215ENST00000484799 GALMQ96C23 342 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 REEP6Q96HR9 211 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 TMEM208Q9BTX3 173 aa2.02□□□□□ -2.09
SMC4-215ENST00000484799 SPZ1Q9BXG8 430 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms