RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SNRPD2P62316 118 aaKnown RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 IL13RA1P78552 427 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SURF2Q15527 256 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MPPED2Q15777 294 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 FAM76BQ5HYJ3 339 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MBNL2Q5VZF2 373 aaKnown RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SIGIRRQ6IA17 410 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 LPCAT3Q6P1A2 487 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 LYG2Q86SG7 212 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 RTN4RL2Q86UN3 420 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MUC20Q8N307 709 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 NUP37Q8NFH4 326 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OR2AK2Q8NG84 335 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OR52B4Q8NGK2 314 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OR2T35Q8NGX2 323 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 ZFAND1Q8TCF1 268 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SULT4A1Q9BR01 284 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 REG4Q9BYZ8 158 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 NARFLQ9H6Q4 476 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 DYNLRB1Q9NP97 96 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MTCH1Q9NZJ7 389 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF230Q9UIE0 474 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 DUSP13Q9UII6 198 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 VSIG4Q9Y279 399 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 NPTNQ9Y639 398 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 ABCA1O95477 2261 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MALRD1Q5VYJ5 2156 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 KIR2DS1A0A191URI9 304 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 PLSCR5A0PG75 271 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 A6NLC8 198 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OR2AT4A6NND4 320 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SDCBPO00560 298 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 GOSR2O14653 212 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 DEGS1O15121 323 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 RGS11O94810 467 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 NXPH2O95156 264 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 GRPP07492 148 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 CTXN2P0C2S0 81 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 OR5H8P0DN80 308 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF44P15621 663 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 AKR1C4P17516 323 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MDH2P40926 338 aaKnown RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 KIR2DS4P43632 304 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 NPY4RP50391 375 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 FGL1Q08830 312 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 DHRS2Q13268 280 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 KIR2DS1Q14954 304 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SRSF7Q16629 238 aaKnown RBP eCLIP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SPRNQ5BIV9 151 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM128Q5BJH2 165 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 PRSS57Q6UWY2 283 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 LHFPL1Q86WI0 220 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 BATF2Q8N1L9 274 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SCCPDHQ8NBX0 429 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 COQ8AQ8NI60 647 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MARCH1Q8TCQ1 289 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MRPL24Q96A35 216 aaKnown RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF2Q9BSG1 426 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 PDCD10Q9BUL8 212 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 CHIAQ9BZP6 476 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 FGF23Q9GZV9 251 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SLA2Q9H6Q3 261 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 TREM2Q9NZC2 230 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 COMMD9Q9P000 198 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MGAT4AQ9UM21 535 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 GPR132Q9UNW8 380 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 DNHD1Q96M86 4753 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 TANC2Q9HCD6 1990 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 IGHV4-61A0A0C4DH41 118 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 C9orf170A2RU37 121 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 CEACAM18A8MTB9 384 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 VSTM5A8MXK1 200 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 B9A039 149 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 SMLR1H3BR10 107 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 CDIPTO14735 213 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 SH2D1BO14796 132 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 OR2A4O95047 310 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 DUS4LO95620 317 aaKnown RBP5.82□□□□□ -1.48
BRCA1-216ENST00000484087 DIRAS3O95661 229 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 HEXAP06865 529 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 ACAA1P09110 424 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-216ENST00000484087 IL2RGP31785 369 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 GLRXP35754 106 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 KLF3P57682 345 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-216ENST00000484087 HERV-K104P61576 105 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF154Q13106 437 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 PDCD1Q15116 288 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 EFNB3Q15768 340 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 ABCA11PQ4W5N1 156 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 SPIN3Q5JUX0 258 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 CLEC2AQ6UVW9 174 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 Q6ZS49 121 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 IL17RELQ6ZVW7 336 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 NLRC3Q7RTR2 1065 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 SGPP2Q8IWX5 399 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM185AQ8NFB2 350 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 C10orf105Q8TEF2 133 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 CASTOR1Q8WTX7 329 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 MITD1Q8WV92 249 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms