RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 NDUFS8O00217 210 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 ADAM20O43506 726 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 IGHV2-70P01814 119 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 SLC6A1P30531 599 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 GLP1RP43220 463 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 GPR6P46095 362 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 NPY4RP50391 375 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 MEF2CQ06413 473 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 ATXN7L3Q14CW9 347 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 OXA1LQ15070 435 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 CDK10Q15131 360 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 RSBN1Q5VWQ0 802 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 PLET1Q6UQ28 207 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 OR4A4PQ8NGN8 299 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 MRPL30Q8TCC3 161 aaKnown RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 CCL13Q99616 98 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 TMEM246Q9BRR3 403 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 MBNL3Q9NUK0 354 aaKnown RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 SLC25A10Q9UBX3 287 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-204ENST00000483941 PCDHB10Q9UN67 800 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 MAB21L2Q9Y586 359 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 CUBNO60494 3623 aa11.64□□□□□ -0.55
SMAD9-204ENST00000483941 A0A1W2PPH5 198 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 TNFRSF13BO14836 293 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-204ENST00000483941 FABP7O15540 132 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 ZNF205O95201 554 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 AMY2AP04746 511 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 FCER2P06734 321 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 HRH1P35367 487 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 P2RX3P56373 397 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 AESQ08117 197 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 CARTPTQ16568 116 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 TMEM30BQ3MIR4 351 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 OR52W1Q6IF63 320 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 ZNRF1Q8ND25 227 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 OR8B3Q8NGG8 313 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 OR4C16Q8NGL9 310 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 OR6F1Q8NGZ6 308 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 SNAPC3Q92966 411 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 OR8B2Q96RD0 313 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 HDHD3Q9BSH5 251 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-204ENST00000483941 DCAF16Q9NXF7 216 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 SLC2A8Q9NY64 477 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 SLC23A1Q9UHI7 598 aa11.63□□□□□ -0.55
SMAD9-204ENST00000483941 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-204ENST00000483941 CHD3Q12873 2000 aaKnown RBP11.63□□□□□ -0.55
SMAD9-204ENST00000483941 DSCAMO60469 2012 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 TRBV23-1A0A0A0MS06 115 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 ODAMA1E959 279 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 SPINT2O43291 252 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 PMP2P02689 132 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 RPS2P15880 293 aaKnown RBP11.62□□□□□ -0.55
SMAD9-204ENST00000483941 NDUFB7P17568 137 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 GIFP27352 417 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 RFX2P48378 723 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 ATP5J2P56134 94 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 EDDM3BP56851 147 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 HLA-DRB3P79483 266 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 EDDM3AQ14507 147 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 RBMS2Q15434 407 aaKnown RBP11.62□□□□□ -0.55
SMAD9-204ENST00000483941 Q5PR19 223 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 OVCH2Q7RTZ1 564 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 NRARPQ7Z6K4 114 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 RTN4RL2Q86UN3 420 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 PLPPR1Q8TBJ4 325 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 DYRK2Q92630 601 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 CREB3L1Q96BA8 519 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 NEIL1Q96FI4 390 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-204ENST00000483941 GSX2Q9BZM3 304 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 EHFQ9NZC4 300 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 NUBP2Q9Y5Y2 271 aa11.62□□□□□ -0.55
SMAD9-204ENST00000483941 RAI1Q7Z5J4 1906 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-204ENST00000483941 ARID1AO14497 2285 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 INAFM1C9JVW0 142 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 OR5H8P0DN80 308 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 RAG2P55895 527 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CR1LQ2VPA4 569 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CD276Q5ZPR3 534 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 IDO2Q6ZQW0 420 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CENPSQ8N2Z9 138 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CIARTQ8N365 385 aaPredicted RBP11.61□□□□□ -0.55
SMAD9-204ENST00000483941 FAM216BQ8N7L0 139 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 TERB2Q8NHR7 220 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 FAM216AQ8WUB2 273 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 CCDC107Q8WV48 283 aa11.61□□□□□ -0.55
SMAD9-204ENST00000483941 GALMQ96C23 342 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms