RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CD40P25942 277 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 GLRXP35754 106 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 ATXN7L3Q14CW9 347 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR5T2Q8NGG2 359 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 UBALD1Q8TB05 177 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 MOB3AQ96BX8 217 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR10C1Q96KK4 312 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 CXXC4Q9H2H0 198 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 SPACA1Q9HBV2 294 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 TUBG2Q9NRH3 451 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 SLC2A9Q9NRM0 540 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR14J1Q9UGF5 321 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 C14orf166Q9Y224 244 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 USP9XQ93008 2570 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 C5orf51A6NDU8 294 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 CRYM-AS1A6NIL9 109 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 HMSDA8MTL9 139 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 TRDCB7Z8K6 153 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 C16orf97H3BN30 126 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 IGHV3-13P01766 116 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF728P0DKX0 622 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 GNRHRP30968 328 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 SNTB1Q13884 538 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.226e-6■■■□□ 15.5
CDC42SE1-204ENST00000483763 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 LPCAT3Q6P1A2 487 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 Q8IYB0 196 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 POC1AQ8NBT0 407 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF680Q8NEM1 530 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 MRPL37Q9BZE1 423 aaKnown RBP7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 RDH8Q9NYR8 311 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
CDC42SE1-204ENST00000483763 LRRK2Q5S007 2527 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 IGLV3-9A0A075B6K5 115 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 DPRXA6NFQ7 191 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 SMAD7O15105 426 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 CLN5O75503 358 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 HAND1O96004 215 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 HOXB5P09067 269 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ACAA1P09110 424 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 KCNJ3P48549 501 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 OPCMLQ14982 345 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF880Q6PDB4 577 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 STX12Q86Y82 276 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 LHFPL5Q8TAF8 219 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 PCNPQ8WW12 178 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 KIRREL1Q96J84 757 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 CLEC4MQ9H2X3 399 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 PIGMQ9H3S5 423 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 RHOFQ9HBH0 211 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 TRBV6-6A0A0A6YYG2 114 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 TEX13DA0A0J9YY54 714 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 hCG_1807616A0A1W2PRN6 198 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 MEX3AA1L020 520 aaKnown RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 H0YIZ8 118 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 L7N2F9 121 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 SPRY3O43610 288 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 IFNA2P01563 188 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR5AC1P0C628 307 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 EGR1P18146 543 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 PCP4P48539 62 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 PXDC1Q5TGL8 231 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 C11orf87Q6NUJ2 197 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ACP7Q6ZNF0 438 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF497Q6ZNH5 498 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF546Q86UE3 836 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 GAPTQ8N292 157 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 PRR18Q8N4B5 295 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 LRRC20Q8TCA0 184 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 RAB18Q9NP72 206 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 C1orf123Q9NWV4 160 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR1A1Q9P1Q5 309 aa7.44□□□□□ -1.22
CDC42SE1-204ENST00000483763 DIDO1Q9BTC0 2240 aaKnown RBP7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 M0R233 179 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 SH2D1BO14796 132 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 TUSC2O75896 110 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 TK1P04183 234 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 GLAP06280 429 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 ECI1P42126 302 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 CASP6P55212 293 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 KLF3P57682 345 aaPredicted RBP7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 TLE1Q04724 770 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 IL15RAQ13261 267 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 RBM39Q14498 530 aaKnown RBP7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 AARDQ4LEZ3 155 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 SPIN3Q5JUX0 258 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF818PQ6ZRF7 136 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 TMUB2Q71RG4 321 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 WFDC8Q8IUA0 241 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 TGIF2LYQ8IUE0 185 aa7.43□□□□□ -1.22
CDC42SE1-204ENST00000483763 SGPP2Q8IWX5 399 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms