RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 DERL3Q96Q80 235 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 BANF2Q9H503 90 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 PAK1IP1Q9NWT1 392 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-212ENST00000482251 CNOT2Q9NZN8 540 aaKnown RBP8.35□□□□□ -1.07
CPSF4-212ENST00000482251 PSORS1C1Q9UIG5 152 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 MOB4Q9Y3A3 225 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 HSPE1-MOB4S4R3N1 261 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
CPSF4-212ENST00000482251 IGHV3-72A0A0B4J1Y9 119 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 H3BUI4 141 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 AIPO00170 330 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 SDCBPO00560 298 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-212ENST00000482251 HSD17B6O14756 317 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-212ENST00000482251 PIN1P1O15428 100 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 IGKV1D-33P01593 117 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 IGKV1-33P01594 117 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 GTF2F2P13984 249 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 TMEM11P17152 192 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 MADCAM1Q13477 382 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 MPV17LQ2QL34 196 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 NHLRC3Q5JS37 347 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 FAM27D1Q5T7N8 215 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 CENPVQ7Z7K6 275 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-212ENST00000482251 LINC00596Q86U02 117 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 SGCDQ92629 289 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 VCXQ9H320 206 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
CPSF4-212ENST00000482251 TGP01266 2768 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 SLC31A2O15432 143 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-212ENST00000482251 CRTAPO75718 401 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-212ENST00000482251 FAM106CPP0CH98 169 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 PF4V1P10720 104 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 MGMTP16455 207 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 PAX5Q02548 391 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 GABPB1Q06547 395 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-212ENST00000482251 TCTEX1D4Q5JR98 221 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 RAB12Q6IQ22 244 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 MOB3BQ86TA1 216 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 TMEM104Q8NE00 496 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 OR4X2Q8NGF9 303 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 OR4K15Q8NH41 348 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 MYDGFQ969H8 173 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 SELENOIQ9C0D9 397 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 KCNK15Q9H427 330 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 LINC00574Q9H8X3 128 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 ETAA1Q9NY74 926 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 NKX1-2Q9UD57 310 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-212ENST00000482251 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 TRAPPC2LQ9UL33 140 aa8.33□□□□□ -1.08
CPSF4-212ENST00000482251 TCRBV4S1A1TA0A5B7 111 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 UBE2QL1A1L167 161 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 C12orf77C9JDV5 145 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 PTGES3LE9PB15 166 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 CCRL2O00421 344 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 GPX5O75715 221 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 PF4P02776 101 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 RAB7AP51149 207 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 AQP4P55087 323 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 EMX1Q04741 257 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-212ENST00000482251 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 SYT6Q5T7P8 510 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-212ENST00000482251 ZNF329Q86UD4 541 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 NANOGP1Q8N7R0 232 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 C5orf56Q8N8D9 126 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 TFAP2CQ92754 450 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-212ENST00000482251 NCOR1P1Q9H4R4 102 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 PCDHB16Q9NRJ7 776 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 FKBP14Q9NWM8 211 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 RCC2Q9P258 522 aaKnown RBP8.32□□□□□ -1.08
CPSF4-212ENST00000482251 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 ERGIC3Q9Y282 383 aa8.32□□□□□ -1.08
CPSF4-212ENST00000482251 IGHV1-3A0A0C4DH29 117 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A18PA6NE21 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A16PA6NEW6 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A20PA6NIJ5 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A9PA6NNJ1 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A12PA8MX19 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 FAM90A5PA8MXJ8 464 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 MCRIP1C9JLW8 97 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 MPIG6BO95866 241 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 MT-ND4P03905 459 aa8.31□□□□□ -1.08
CPSF4-212ENST00000482251 CDK1P06493 297 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms