RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ARPC1BO15143 372 aaKnown RBP11.44□□□□□ -0.58
HDAC6-224ENST00000481929 APOL3O95236 402 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
HDAC6-224ENST00000481929 UBCP0CG48 685 aaKnown RBP11.44□□□□□ -0.58
HDAC6-224ENST00000481929 ZNF20P17024 532 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 FAM98BQ52LJ0 330 aaKnown RBP11.44□□□□□ -0.58
HDAC6-224ENST00000481929 RSBN1Q5VWQ0 802 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-224ENST00000481929 GATAD1Q8WUU5 269 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 SPACA5Q96QH8 159 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 ADGRL4Q9HBW9 690 aa11.44□□□□□ -0.58
HDAC6-224ENST00000481929 IGHV7-81A0A0B4J1V7 117 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 A0A1W2PN81 502 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 TCRBV5S2A0A599 114 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 BLVRBP30043 206 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-224ENST00000481929 CHRNA7P36544 502 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 PAX5Q02548 391 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 SPATS1Q496A3 300 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 SSX6Q7RTT6 188 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 C8orf31Q8N9H6 132 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 PLPPR1Q8TBJ4 325 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 FGGYQ96C11 551 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-224ENST00000481929 ST6GALNAC5Q9BVH7 336 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 ERGIC3Q9Y282 383 aa11.43□□□□□ -0.58
HDAC6-224ENST00000481929 KMT2AQ03164 3969 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 TRAV24A0A0B4J272 114 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 METTL15A6NJ78 407 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 SDCBPO00560 298 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-224ENST00000481929 DBTP11182 482 aaKnown RBP11.42□□□□□ -0.58
HDAC6-224ENST00000481929 KCNJ3P48549 501 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 RDH10Q8IZV5 341 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 PRSS35Q8N3Z0 413 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 OR52M1Q8NGK5 317 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 CNIH3Q8TBE1 160 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 CASTOR1Q8WTX7 329 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 TBX5Q99593 518 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 GFOD1Q9NXC2 390 aa11.42□□□□□ -0.58
HDAC6-224ENST00000481929 H2AFY2Q9P0M6 372 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-224ENST00000481929 FOXA2Q9Y261 457 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-224ENST00000481929 SOX15O60248 233 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 RGS11O94810 467 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 CST1P01037 141 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 TMEM225BP0DP42 221 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 GZMHP20718 246 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 MNAT1P51948 309 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 RAB40BQ12829 278 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 FAHD1Q6P587 224 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 BCDIN3DQ7Z5W3 292 aaKnown RBP11.41□□□□□ -0.58
HDAC6-224ENST00000481929 TMEM179BQ7Z7N9 219 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
HDAC6-224ENST00000481929 OR13C9Q8NGT0 318 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 ARL11Q969Q4 196 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 CST11Q9H112 138 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 MYRFQ9Y2G1 1151 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
HDAC6-224ENST00000481929 IGHV3-43A0A0B4J1X8 118 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 SHISA3A0PJX4 238 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 PRKYO43930 277 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 BRI3O95415 125 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 MT-ND2P03891 347 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 CSTBP04080 98 aaKnown RBP11.4□□□□□ -0.58
HDAC6-224ENST00000481929 IGHV3-43DP0DP04 118 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 FSTP19883 344 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 VHLP40337 213 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 ZNF137PP52743 207 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 ACTBP60709 375 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 LSAMPQ13449 338 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 Q3ZCU0 254 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 TMEM244Q5VVB8 128 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 LINC00322Q6ZN03 302 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-224ENST00000481929 SLC25A48Q6ZT89 311 aaKnown RBP11.4□□□□□ -0.58
HDAC6-224ENST00000481929 DEFB107AQ8IZN7 70 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 UBALD1Q8TB05 177 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 ZNF251Q9BRH9 671 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-224ENST00000481929 ANKRD60Q9BZ19 345 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 PRRG3Q9BZD7 231 aa11.4□□□□□ -0.58
HDAC6-224ENST00000481929 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 GNGT2O14610 69 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 SLC31A2O15432 143 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 NBR2O15453 112 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 SULT1C4O75897 302 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 C5orf64Q2M2E5 130 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 C19orf54Q5BKX5 351 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 PYHIN1Q6K0P9 492 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 LIN54Q6MZP7 749 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 UTP4Q969X6 686 aaKnown RBP11.39□□□□□ -0.59
HDAC6-224ENST00000481929 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 PLEKHA3Q9HB20 300 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 DNAH10Q8IVF4 4471 aa11.39□□□□□ -0.59
HDAC6-224ENST00000481929 A0A1W2PQL4 384 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms