RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 PPIAL4GP0DN37 164 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 IL7P13232 177 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 GDNFP39905 211 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 ECI1P42126 302 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 OR3A3P47888 321 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 GLIPR1P48060 266 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 INPP1P49441 399 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 CEBPDP49716 269 aaPredicted RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 EDDM3BP56851 147 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DEFA1P59665 94 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DEFA3P59666 94 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 SEC61A1P61619 476 aaKnown RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DGCR2P98153 550 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DCTN2Q13561 401 aaKnown RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 ATXN7L3Q14CW9 347 aaPredicted RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 PDCD1Q15116 288 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DHRS11Q6UWP2 260 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 HEPN1Q6WQI6 88 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 IZUMO1Q8IYV9 350 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 C8orf31Q8N9H6 132 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DACT3Q96B18 629 aaPredicted RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 CABLES2Q9BTV7 478 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 REG4Q9BYZ8 158 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 NECAP2Q9NVZ3 263 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 COPZ2Q9P299 210 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 KLK11Q9UBX7 282 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 RPUSD1Q9UJJ7 312 aaKnown RBP6.83□□□□□ -1.32
SYNE1-225ENST00000481502 KPTNQ9Y664 436 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 DOCK11Q5JSL3 2073 aa6.83□□□□□ -1.32
SYNE1-225ENST00000481502 CREBBPQ92793 2442 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 POLQO75417 2590 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
SYNE1-225ENST00000481502 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 LOC105371242A0A075B767 164 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 A0A087X0M5 115 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TRBV6-7A0A0A0MS04 114 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TRAV20A0A0B4J274 112 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 A0A1B0GX30 115 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 YPEL1O60688 119 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 SLC22A5O76082 557 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ZBTB25P24278 435 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 GZMKP49863 264 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ARPC4P59998 168 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 HLA-DRB3P79483 266 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 PAX2Q02962 417 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ASAH1Q13510 395 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 KLF9Q13886 244 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-225ENST00000481502 CDK10Q15131 360 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 SURF2Q15527 256 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-225ENST00000481502 MSMO1Q15800 293 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 BAK1Q16611 211 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 CHRFAM7AQ494W8 412 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 RNASE10Q5GAN6 216 aaKnown RBP6.82□□□□□ -1.32
SYNE1-225ENST00000481502 OLFML2AQ68BL7 652 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TMEM200BQ69YZ2 307 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 STEAP1BQ6NZ63 245 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 BTNL3Q6UXE8 466 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 BTN2A1Q7KYR7 527 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 RTN4RL2Q86UN3 420 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 LYSMD2Q8IV50 215 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TEX29Q8N6K0 151 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 OR4K15Q8NH41 348 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 GIMAP1Q8WWP7 306 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 EDARADDQ8WWZ3 215 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 DYRK2Q92630 601 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TNFRSF14Q92956 283 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 COX4I2Q96KJ9 171 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF714Q96N38 554 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 SCGB3A2Q96PL1 93 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 YPEL2Q96QA6 119 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 PRRT1Q99946 306 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ST6GALNAC5Q9BVH7 336 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 TAF9BQ9HBM6 251 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 SLC2A8Q9NY64 477 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 ZNF581Q9P0T4 197 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 SCP2D1Q9UJQ7 156 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 JPT1Q9UK76 154 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 CELSR2Q9HCU4 2923 aa6.82□□□□□ -1.32
SYNE1-225ENST00000481502 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 IGHV4-61A0A0C4DH41 118 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 KIAA1324LA8MWY0 1029 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 DISC1C4P0D8 188 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 J3QLI3 93 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 HSPB6O14558 160 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 RAB3DO95716 219 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 IFNA6P05013 189 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 FCER2P06734 321 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 RCC1P18754 421 aaPredicted RBP6.81□□□□□ -1.32
SYNE1-225ENST00000481502 FPR2P25090 351 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 CD34P28906 385 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 IL2RGP31785 369 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 BPIFB3P59826 476 aa6.81□□□□□ -1.32
SYNE1-225ENST00000481502 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms