RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TMEM30CPA0ZSE6 113 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 METTL21EPA6NDL7 271 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 A6NHS1 94 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 RNASEK-C17orf49H0YIS7 233 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 C15orf65H3BRN8 121 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 M0R1W7 72 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 MFNGO00587 321 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 HPGDSO60760 199 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 HIST1H1DP16402 221 aaKnown RBP9.99□□□□□ -0.81
TRA2B-212ENST00000480461 ELK1P19419 428 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 OMGP23515 440 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 PRTN3P24158 256 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 CDK2P24941 298 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 RANBP1P43487 201 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 KLRD1Q13241 179 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 RBM39Q14498 530 aaKnown RBP9.99□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF260Q3ZCT1 412 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 PDZD9Q8IXQ8 264 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 PNKDQ8N490 385 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 RFESDQ8TAC1 157 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 UBALD1Q8TB05 177 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 DGCR14Q96DF8 476 aaKnown RBP9.99□□□□□ -0.81
TRA2B-212ENST00000480461 MIXL1Q9H2W2 232 aa9.99□□□□□ -0.81
TRA2B-212ENST00000480461 UNKLQ9H9P5 680 aaKnown RBP9.99□□□□□ -0.81
TRA2B-212ENST00000480461 UBE2J1Q9Y385 318 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-212ENST00000480461 A0A075B6Q4 140 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 TRGV10A0A0A0MS01 117 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 KBTBD11-OT1A0A1B0GTJ5 212 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 SMIM31A0A1B0GVY4 71 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 FUOMA2VDF0 154 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 CCDC160A6NGH7 325 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 NPIPB11E5RHQ5 1161 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF701M0R085 212 aaPredicted RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 PTHLHP12272 177 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 SSTR5P35346 364 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 DYNC1I2Q13409 638 aaKnown RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 METTL11BQ5VVY1 283 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF880Q6PDB4 577 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 IZUMO1Q8IYV9 350 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF565Q8N9K5 539 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 LHX4Q969G2 390 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 NXF2Q9GZY0 626 aaKnown RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 METTL8Q9H825 291 aaKnown RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 MBNL3Q9NUK0 354 aaKnown RBP9.98□□□□□ -0.81
TRA2B-212ENST00000480461 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 OR6C3Q9NZP0 311 aa9.98□□□□□ -0.81
TRA2B-212ENST00000480461 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 TRAV18A0A075B6X5 111 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 C12orf77C9JDV5 145 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 H3BUI4 141 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 SSX5O60225 188 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 CA11O75493 328 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 HLA-DQB1P01920 261 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 IGHV1-8P0DP01 117 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 GZMHP20718 246 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 GLP1RP43220 463 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 TUSC1Q2TAM9 212 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 LDLRAD2Q5SZI1 272 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 HEPN1Q6WQI6 88 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 C12orf54Q6X4T0 127 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF782Q6ZMW2 699 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-212ENST00000480461 TRAPPC6BQ86SZ2 158 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 ACOT12Q8WYK0 555 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 DCUN1D5Q9BTE7 237 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.97□□□□□ -0.819e-8■■■■■ 31
TRA2B-212ENST00000480461 CALYQ9NYX4 217 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF69Q9UC07 566 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 ZNF230Q9UIE0 474 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-212ENST00000480461 KIAA2026Q5HYC2 2103 aa9.97□□□□□ -0.81
TRA2B-212ENST00000480461 IGKV1D-8A0A087WSZ0 117 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 TRBV6-6A0A0A6YYG2 114 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 A0A1W2PRD5 423 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 A0A1W2PRF3 423 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 A0A1W2PRM7 423 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 TMEM235A6NFC5 223 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.82
TRA2B-212ENST00000480461 XRCC3O43542 346 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 APOA1P02647 267 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 MELTFP08582 738 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 HNF1AP20823 631 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 LOXL3P58215 753 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 MADCAM1Q13477 382 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 FAM189A2Q15884 450 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 HACD4Q5VWC8 232 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 RUSC1-AS1Q66K80 236 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 BRD3OSQ6XYD6 125 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 OR1L1Q8NH94 360 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 NANPQ8TBE9 248 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 C17orf50Q8WW18 174 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 C22orf15Q8WYQ4 148 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 ARL11Q969Q4 196 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 S100A16Q96FQ6 103 aaKnown RBP9.96□□□□□ -0.82
TRA2B-212ENST00000480461 KIRREL1Q96J84 757 aa9.96□□□□□ -0.82
TRA2B-212ENST00000480461 CMSS1Q9BQ75 279 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms