RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 C19orf24Q9BVV8 132 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 CST11Q9H112 138 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 METTL9Q9H1A3 318 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 GHITMQ9H3K2 345 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 RIMS4Q9H426 269 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 EXOSC4Q9NPD3 245 aaKnown RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ESM1Q9NQ30 184 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SNTG1Q9NSN8 517 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 ZNRD1Q9P1U0 126 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 AASSQ9UDR5 926 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SLC23A1Q9UHI7 598 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 MGAT4AQ9UM21 535 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 LRRC42Q9Y546 428 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 SIRT4Q9Y6E7 314 aaPredicted RBP3.98□□□□□ -1.77
PTCD3-213ENST00000480102 CR1P17927 2039 aa3.98□□□□□ -1.77
PTCD3-213ENST00000480102 TANC2Q9HCD6 1990 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV3OR15-7A0A075B7D8 119 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TRBV6-6A0A0A6YYG2 114 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TRAV24A0A0B4J272 114 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 KBTBD11-OT1A0A1B0GTJ5 212 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 A0A1W2PQ09 198 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ODAMA1E959 279 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 GAGE12BA1L429 117 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 GAGE12HA6NDE8 117 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 DNAJC9-AS1A6NH13 148 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF729A6NN14 1252 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-213ENST00000480102 F8VVB4 439 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 F8VWA3 439 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-213ENST00000480102 GABRPO00591 440 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ITGB1BP1O14713 200 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 NPFFO15130 113 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ORC5O43913 435 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 CLPXO76031 633 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SCGNO76038 276 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 IL1AP01583 271 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 MELTFP08582 738 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 HCKP08631 526 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 IGHV1-8P0DP01 117 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TMEM225BP0DP42 221 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 NDUFB7P17568 137 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SRMP19623 302 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 BCL3P20749 454 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SAA4P35542 130 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 CEACAM3P40198 252 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 KIR2DS4P43632 304 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ARHGDIBP52566 201 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF137PP52743 207 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 BAMBIQ13145 260 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ARL6IP1Q15041 203 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 GRK1Q15835 563 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SRSF7Q16629 238 aaKnown RBP eCLIP3.97□□□□□ -1.77
PTCD3-213ENST00000480102 DEFB112Q30KQ8 113 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ACSM3Q53FZ2 586 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 DDI2Q5TDH0 399 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 HCP5Q6MZN7 132 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 CCDC144NLQ6NUI1 221 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TCF23Q7RTU1 214 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 OR2W3Q7Z3T1 314 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 OSR2Q8N2R0 312 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SIGLECL1Q8N7X8 197 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 OR5T2Q8NGG2 359 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 OR6M1Q8NGM8 313 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 OR4F5Q8NH21 305 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SGMS2Q8NHU3 365 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 KCNG3Q8TAE7 436 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TNFAIP8L1Q8WVP5 186 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SLAMF9Q96A28 289 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SEH1LQ96EE3 360 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 S100A13Q99584 98 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 MGLLQ99685 303 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TM2D1Q9BX74 207 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TTTY10Q9BZA0 68 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF696Q9H7X3 374 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 AKIP1Q9NQ31 210 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 C19orf12Q9NSK7 152 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 RBFOX1Q9NWB1 397 aaKnown RBP3.97□□□□□ -1.77
PTCD3-213ENST00000480102 NDUFB11Q9NX14 153 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 PITPNC1Q9UKF7 332 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 VPREB3Q9UKI3 123 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 HSF4Q9ULV5 492 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 FAM96BQ9Y3D0 163 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 DMRT1Q9Y5R6 373 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 SESN1Q9Y6P5 492 aa3.97□□□□□ -1.77
PTCD3-213ENST00000480102 TRAV8-7A0A075B6U6 113 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 A0A1B0GW55 424 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TRDV1A0A1B0GX56 115 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 BTBD17A6NE02 478 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TRIM64CA6NLI5 447 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 FAM90A9PA6NNJ1 464 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM14DPA8MWL7 114 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 M0QZK8 103 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 CCRL2O00421 344 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 SLC17A2O00624 439 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DEGS1O15121 323 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 PIN1P1O15428 100 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 TXNL1O43396 289 aa3.96□□□□□ -1.78
PTCD3-213ENST00000480102 CSTBP04080 98 aaKnown RBP3.96□□□□□ -1.78
PTCD3-213ENST00000480102 DUX4L2P0CJ85 424 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms