RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 LEUTXA8MZ59 168 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 K7ERS5 55 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 ATP6V1G2O95670 118 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 PDYNP01213 254 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 IGHG2P01859 326 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 PSKH1P11801 424 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 MLNP12872 115 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 MAGEA2P43356 314 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 RAB2AP61019 212 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 CASP8Q14790 479 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 HLA-DRB5Q30154 266 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 ZCWPW2Q504Y3 356 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 CDKL4Q5MAI5 379 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 CCDC122Q5T0U0 273 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 PTRHD1Q6GMV3 140 aaKnown RBP2.87□□□□□ -1.95
UPF3B-203ENST00000478840 FAM19A5Q7Z5A7 132 aaPredicted RBP2.87□□□□□ -1.95
UPF3B-203ENST00000478840 RNF182Q8N6D2 247 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 MAL2Q969L2 176 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 CMTM5Q96DZ9 223 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 REEP6Q96HR9 211 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 SEC22CQ9BRL7 303 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 POTEKPQ9BYX7 375 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 SLC22A4Q9H015 551 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 ZNF586Q9NXT0 402 aa2.87□□□□□ -1.95
UPF3B-203ENST00000478840 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 BIRC5O15392 142 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 CTSEP14091 401 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 GABRA1P14867 456 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 GRPRP30550 384 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 RBX1P62877 108 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 DNAL1Q4LDG9 190 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 HENMT1Q5T8I9 393 aaKnown RBP2.86□□□□□ -1.95
UPF3B-203ENST00000478840 LAIR2Q6ISS4 152 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 SGPP2Q8IWX5 399 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 RIBC1Q8N443 379 aaPredicted RBP2.86□□□□□ -1.95
UPF3B-203ENST00000478840 OR5D18Q8NGL1 313 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 OR5K1Q8NHB7 308 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 CMBLQ96DG6 245 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 PLA2G12AQ9BZM1 189 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 USE1Q9NZ43 259 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 TMEM216Q9P0N5 145 aa2.86□□□□□ -1.95
UPF3B-203ENST00000478840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.86□□□□□ -1.95
UPF3B-203ENST00000478840 TINCRA0A1B0GVN0 87 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 A8MWP4 228 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 F5H768 121 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 ASS1P00966 412 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 LTAP01374 205 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 PFN1P07737 140 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 OCM2P0CE71 109 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 C8orf88P0DMB2 117 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 COX5BP10606 129 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 AGTR1P30556 359 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 CD79BP40259 229 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 CDC34P49427 236 aaPredicted RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 DYNLL1P63167 89 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 KHDRBS2Q5VWX1 349 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 IGFL1Q6UW32 110 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 KRTCAP2Q8N6L1 136 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 OR4C13Q8NGP0 309 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 OR9I1Q8NGQ6 314 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 PPCDCQ96CD2 204 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 RMI2Q96E14 147 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 NSRP1Q9H0G5 558 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 TRIM45Q9H8W5 580 aaPredicted RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 DHCR7Q9UBM7 475 aaKnown RBP2.85□□□□□ -1.95
UPF3B-203ENST00000478840 TRAPPC1Q9Y5R8 145 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 MYO3BQ8WXR4 1341 aa2.85□□□□□ -1.95
UPF3B-203ENST00000478840 YLPM1P49750 1951 aaKnown RBP2.84□□□□□ -1.95
UPF3B-203ENST00000478840 IGHV3OR15-7A0A075B7D8 119 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 OR5H14A6NHG9 310 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 OR6C70A6NIJ9 312 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 M0QYV0 167 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 ZW10O43264 779 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 STX10O60499 249 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 DEXIO95424 95 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 AHSA1O95433 338 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 PSMG1O95456 288 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 CD99P14209 185 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 GADD45AP24522 165 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 CD34P28906 385 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 TGFBR2P37173 567 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 MAGOHP61326 146 aaKnown RBP2.84□□□□□ -1.95
UPF3B-203ENST00000478840 IGFBP7Q16270 282 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 LDLRAD2Q5SZI1 272 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 HES3Q5TGS1 186 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 CPNE9Q8IYJ1 553 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 Q8N402 240 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 KCTD4Q8WVF5 259 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 RBPMSQ93062 196 aaKnown RBP2.84□□□□□ -1.95
UPF3B-203ENST00000478840 KCTD7Q96MP8 289 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 SPZ1Q9BXG8 430 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 ALX4Q9H161 411 aaPredicted RBP2.84□□□□□ -1.95
UPF3B-203ENST00000478840 OR2D2Q9H210 308 aa2.84□□□□□ -1.95
UPF3B-203ENST00000478840 THADAQ6YHU6 1953 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 METTL15A6NJ78 407 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF729A6NN14 1252 aaPredicted RBP2.83□□□□□ -1.96
UPF3B-203ENST00000478840 H3BQ85 93 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms