RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CISD1Q9NZ45 108 aaKnown RBP3.67□□□□□ -1.82
GPNMB-210ENST00000478451 OR5AC2Q9NZP5 309 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 GSKIPQ9P0R6 139 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 ANXA10Q9UJ72 324 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 NXT1Q9UKK6 140 aaKnown RBP3.67□□□□□ -1.82
GPNMB-210ENST00000478451 RARRES3Q9UL19 164 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 PADI1Q9ULC6 663 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 F5P12259 2224 aa3.67□□□□□ -1.82
GPNMB-210ENST00000478451 UNC13CQ8NB66 2214 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 A0A0A6YYD4 124 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 A0A1B0GW64 132 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LRP5LA4QPB2 252 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PCP4L1A6NKN8 68 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF850A8MQ14 1090 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FOXI3A8MTJ6 420 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 UMAD1C9J7I0 102 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 TIMM23O14925 209 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ST8SIA3O43173 380 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 TGOLN2O43493 480 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LRP3O75074 770 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SCRG1O75711 98 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 RAD51DO75771 328 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 NDUFB4O95168 129 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 CDS2O95674 445 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 IFNA17P01571 189 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 IGLV3-1P01715 115 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 HBE1P02100 147 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PRH1P02810 166 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 HPNP05981 417 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SPP1P10451 314 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 MMP9P14780 707 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FOLR1P15328 257 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 MUC1P15941 1255 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF14P17017 642 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF17P17021 662 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SERPINA2P20848 420 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 CD80P33681 288 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SFTPDP35247 375 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PTGER4P35408 488 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LPAR6P43657 344 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 NPBWR1P48145 328 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 KCNJ3P48549 501 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 COMPP49747 757 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PDLIM4P50479 330 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 P2RY4P51582 365 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 AKR1C2P52895 323 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 TMEM50BP56557 158 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 CLDN17P56750 224 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR1D5P58170 312 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PCBD1P61457 104 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SUPT4H1P63272 117 aaKnown RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 HIST1H3AP68431 136 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 MRPS34P82930 218 aaKnown RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 AKR1C1Q04828 323 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF616Q08AN1 781 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 IL15RAQ13261 267 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 MFAP5Q13361 173 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 RBM39Q14498 530 aaKnown RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 RAB35Q15286 201 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SHHQ15465 462 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 EXT1Q16394 746 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 GUK1Q16774 197 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ANKRD55Q3KP44 614 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF528Q3MIS6 628 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 NKAIN1Q4KMZ8 207 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 HIST2H3PS2Q5TEC6 136 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FAM69BQ5VUD6 431 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 AADACL3Q5VUY0 350 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 GGNBP1Q5YKI7 109 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 RPL7L1Q6DKI1 246 aaKnown RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 DPPA3Q6W0C5 159 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FBXW12Q6X9E4 464 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FOXL2NBQ6ZUU3 175 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LANCL3Q6ZV70 420 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 CBLN2Q8IUK8 224 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 PRSS58Q8IYP2 241 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 MAML2Q8IZL2 1156 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LGI3Q8N145 548 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 APCDD1LQ8NCL9 501 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 NFAM1Q8NET5 270 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR2M3Q8NG83 312 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR10S1Q8NGN2 331 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR4A4PQ8NGN8 299 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR1J1Q8NGS3 322 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 LYPD6BQ8NI32 183 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 RXFP4Q8TDU9 374 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 FAM216AQ8WUB2 273 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SFT2D1Q8WV19 159 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 TMEM54Q969K7 222 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 ZNF524Q96C55 264 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 SPACA9Q96E40 222 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 GNPNAT1Q96EK6 184 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 BORCS8Q96FH0 119 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 GALNT14Q96FL9 552 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 OR10C1Q96KK4 312 aa3.66□□□□□ -1.82
GPNMB-210ENST00000478451 C1orf147Q96MC9 270 aaPredicted RBP3.66□□□□□ -1.82
GPNMB-210ENST00000478451 CMSS1Q9BQ75 279 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms