RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 BATF3Q9NR55 127 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 DDX19AQ9NUU7 478 aaKnown RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 C14orf166Q9Y224 244 aaKnown RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 PRELID3BQ9Y3B1 194 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 LSM5Q9Y4Y9 91 aaKnown RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 COL4A4P53420 1690 aaPredicted RBP2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 NRCAMQ92823 1304 aa2.37□□□□□ -2.03
SMARCA1-204ENST00000478420 IGLV11-55A0A075B6I3 123 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CCL15-CCL14A0A0B4J2E2 113 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 A0A1B0GV72 72 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PGPA6NDG6 321 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 DNASE2O00115 360 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 UPK1AO00322 258 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 MANBAO00462 879 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PLIN3O60664 434 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 SERPINB7O75635 380 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 ARL6IP5O75915 188 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OR2B3O76000 313 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 WISP3O95389 354 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 HMGN1P05114 100 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 IL3P08700 152 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 ESDP10768 282 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CYBAP13498 195 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC6A1P30531 599 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 TALDO1P37837 337 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 SLC18A1P54219 525 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CCL23P55773 120 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 GFERP55789 205 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 RAB25P57735 213 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 GTF2BQ00403 316 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PSG4Q00888 419 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PNOCQ13519 176 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 C1DQ13901 141 aaKnown RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CCL15Q16663 113 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 RSPO1Q2MKA7 263 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 ZCWPW2Q504Y3 356 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 TRMT12Q53H54 448 aaKnown RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF684Q5T5D7 378 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CEMP1Q6PRD7 247 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OPN5Q6U736 354 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CLEC20AQ6ZU45 233 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OLIG3Q7RTU3 272 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 NEGR1Q7Z3B1 354 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 NAA40Q86UY6 237 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PCP2Q8IVA1 136 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 C1orf158Q8N1D5 194 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 DRAM1Q8N682 238 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OR10G6Q8NH81 332 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF420Q8TAQ5 688 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 DCAKDQ8WVC6 231 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 GHSRQ92847 366 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 TMBIM1Q969X1 311 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 EXOSC8Q96B26 276 aaKnown RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OR4K3Q96R72 315 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OR52B2Q96RD2 323 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 SIGMAR1Q99720 223 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PRSS27Q9BQR3 290 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 DDA1Q9BW61 102 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 LHX9Q9NQ69 397 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 FAM49BQ9NUQ9 324 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PARVAQ9NVD7 372 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 OR12D3Q9UGF7 316 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 KLF13Q9Y2Y9 288 aaPredicted RBP2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 NDUFAF1Q9Y375 327 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 PEG3Q9GZU2 1588 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 CPDO75976 1380 aa2.36□□□□□ -2.03
SMARCA1-204ENST00000478420 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 LOC389332A0A1B0GUA5 103 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 PLAC8L1A1L4L8 177 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 MYBPHLA2RUH7 354 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 FAM159BA6NKW6 160 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 M0R1X1 148 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 UPK2O00526 184 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 NOS1APO75052 506 aaPredicted RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ATP5G1P05496 136 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 NBEAP1P0C6P0 100 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ZDHHC11BP0C7U3 371 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CD36P16671 472 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 PRTN3P24158 256 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 AGTR1P30556 359 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 RPL5P46777 297 aaKnown RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CDK9P50750 372 aaKnown RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 GZMMP51124 257 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 H2BFSP57053 126 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 TAS2R41P59536 307 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 CRADDP78560 199 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 HPCAP84074 193 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 IFITM3Q01628 133 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 EMX1Q04741 257 aaPredicted RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 DEFB116Q30KQ4 102 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ACOT6Q3I5F7 207 aaPredicted RBP2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ZNF404Q494X3 552 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 LIN52Q52LA3 116 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 ORMDL2Q53FV1 153 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 MESTQ5EB52 335 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 TCEAL5Q5H9L2 206 aa2.35□□□□□ -2.03
SMARCA1-204ENST00000478420 HIST2H3PS2Q5TEC6 136 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms