RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CALHM1Q8IU99 346 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 C10orf111Q8N326 155 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 ZNF671Q8TAW3 534 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 FBXO25Q8TCJ0 367 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 ACTRT1Q8TDG2 376 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 H1FXQ92522 213 aaKnown RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 STMN2Q93045 179 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 APOBEC3DQ96AK3 386 aaPredicted RBP3.2□□□□□ -1.9
VPS50-214ENST00000477935 L3HYPDHQ96EM0 354 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 TEX37Q96LM6 180 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 RBP7Q96R05 134 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 DPH5Q9H2P9 285 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 TUBA4BQ9H853 241 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 Q9HAA7 133 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 C1orf123Q9NWV4 160 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 NDUFA13Q9P0J0 144 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 KLHDC2Q9Y2U9 406 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 IFT52Q9Y366 437 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 MINOS1-NBL1R4GNA1 71 aa3.2□□□□□ -1.9
VPS50-214ENST00000477935 LRP1BQ9NZR2 4599 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 TNCP24821 2201 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 A0A1W2PRG6 482 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 C11orf98E9PRG8 122 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 IMPA2O14732 288 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 SGCEO43556 437 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 RBMY1A1P0DJD3 496 aaKnown RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 PRG2P13727 222 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 CHI3L1P36222 383 aaPredicted RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 MAGEA12P43365 314 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 ERFP50548 548 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 DAP3P51398 398 aaKnown RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 MFAP2P55001 183 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 RPL38P63173 70 aaKnown RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 SPIBQ01892 262 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 OR8G1Q15617 311 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 ZNF79Q15937 498 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 SYPL1Q16563 259 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 ANXA8L1Q5VT79 327 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 FAM219BQ5XKK7 198 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 LHFPL4Q7Z7J7 247 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 RIMKLAQ8IXN7 391 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 MKXQ8IYA7 352 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 LRRC34Q8IZ02 419 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 DYNAPQ8N1N2 210 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 TRIML2Q8N7C3 387 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 FAM216BQ8N7L0 139 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 BHLHE23Q8NDY6 225 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 NOXO1Q8NFA2 376 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 OR11H6Q8NGC7 330 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 OR6M1Q8NGM8 313 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 OR13D1Q8NGV5 346 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 AENQ8WTP8 325 aaKnown RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 SPRYD4Q8WW59 207 aaPredicted RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 HIST1H2ACQ93077 130 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 MS4A14Q96JA4 679 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 PPP3R2Q96LZ3 170 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 RBM14Q96PK6 669 aaKnown RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 NABP2Q9BQ15 211 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 TMEM43Q9BTV4 400 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 TXNIPQ9H3M7 391 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 TAS2R5Q9NYW4 299 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 MARCOQ9UEW3 520 aaPredicted RBP3.19□□□□□ -1.9
VPS50-214ENST00000477935 ATPIF1Q9UII2 106 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 UGT2A1Q9Y4X1 527 aa3.19□□□□□ -1.9
VPS50-214ENST00000477935 IGHV3OR15-7A0A075B7D8 119 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 A0A1B0GWA3 101 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OR6C6A6NF89 314 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 SERPINE3A8MV23 424 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ODF3BA8MYP8 253 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 H3BSH0 61 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OVOL1O14753 267 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ARG1P05089 322 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 IGHV1-8P0DP01 117 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 MSR1P21757 451 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 MEOX2P50222 304 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 SERPINB9P50453 376 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 CNN1P51911 297 aaKnown RBP3.18□□□□□ -1.9
VPS50-214ENST00000477935 CRISP3P54108 245 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 CXCL6P80162 114 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 DR1Q01658 176 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 DDI2Q5TDH0 399 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 STEAP1BQ6NZ63 245 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 C1orf94Q6P1W5 598 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 PRSS48Q7RTY5 328 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 C10orf107Q8IVU9 208 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 PGAM4Q8N0Y7 254 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 CNPY4Q8N129 248 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 CLEC4FQ8N1N0 589 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OR11H1Q8NG94 326 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OR8J2Q8NGG1 315 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OR4A15Q8NGL6 344 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 VN1R17PQ8TDU5 208 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 C4orf3Q8WVX3 66 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 OR4C12Q96R67 309 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 TMEM27Q9HBJ8 222 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ADGRL4Q9HBW9 690 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ISYNA1Q9NPH2 558 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms