RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 UQCRHLA0A096LP55 91 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 FAM240AA0A1B0GVK7 77 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 GNG14A0A1W2PPG7 69 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ZNF729A6NN14 1252 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 CENPXA8MT69 81 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TMEM114B3SHH9 223 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 MKRN2OSH3BPM6 223 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 M0QXV9 152 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 LIN7AO14910 233 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 TRAPPC6AO75865 159 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CST4P01036 141 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 UQCRHP07919 91 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CTSGP08311 255 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ZNF708P17019 499 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 SYT1P21579 422 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 SERPINB1P30740 379 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 COILP38432 576 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 CD79BP40259 229 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 MAGEA6P43360 314 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CEBPGP53567 150 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 RAB4BP61018 213 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 PSME3P61289 254 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ERVS71-1P61550 626 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 BNIP2Q12982 314 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TPBGQ13641 420 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ENDOGQ14249 297 aaKnown RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 SSX1Q16384 188 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TNXAQ16473 311 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TMEM241Q24JQ0 296 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 FAM27D1Q5T7N8 215 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 C3orf33Q6P1S2 294 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ZNF773Q6PK81 442 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CLEC19AQ6UXS0 136 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 PLEKHG7Q6ZR37 379 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TMPPEQ6ZT21 453 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 GID4Q8IVV7 300 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 LINC00337Q8N6G1 96 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 CCDC112Q8NEF3 446 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 OR2K2Q8NGT1 345 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 DNAJB3Q8WWF6 145 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 OR5P3Q8WZ94 311 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CCDC124Q96CT7 223 aaKnown RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 RMND5BQ96G75 393 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 SLC25A44Q96H78 314 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 GLT1D1Q96MS3 346 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 DHRS9Q9BPW9 319 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 BEX2Q9BXY8 128 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 C6orf62Q9GZU0 229 aaPredicted RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 CHRNA10Q9GZZ6 450 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 WDR54Q9H977 334 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ASCL3Q9NQ33 180 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 BATF3Q9NR55 127 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 CMTM6Q9NX76 183 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 TAS2R9Q9NYW1 312 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 NXT1Q9UKK6 140 aaKnown RBP1.26□□□□□ -2.21
VPS50-213ENST00000477572 FBXL3Q9UKT7 428 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 INSIG2Q9Y5U4 225 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 ZNF780BQ9Y6R6 833 aa1.26□□□□□ -2.21
VPS50-213ENST00000477572 PTPRGP23470 1445 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 ADGRL3Q9HAR2 1447 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 NUP155O75694 1391 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 CCDC171Q6TFL3 1326 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 A0A1W2PQL4 384 aaPredicted RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 A0A1W2PRF3 423 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 A0A1W2PRM7 423 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 C2orf74A8MZ97 194 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 LINC00587B1AMM8 73 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 RNASEK-C17orf49H0YIS7 233 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 K7ERS5 55 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 RFXANKO14593 260 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SC5DO75845 299 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 CRYZL1O95825 349 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 ASS1P00966 412 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 IGKV1D-33P01593 117 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 IGKV1-33P01594 117 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 IGHV3-53P01767 116 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 OCMP0CE72 109 aaPredicted RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 SLC35E2BP0CK96 405 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 M6PRP20645 277 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 UGT2B10P36537 528 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 MAGEA2P43356 314 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 OMPP47874 163 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 RAP1GDS1P52306 607 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SLC18A1P54219 525 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 LSM6P62312 80 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 RPL31P62899 125 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 PSPHP78330 225 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SLC35B1P78383 322 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 MRPS25P82663 173 aaKnown RBP1.25□□□□□ -2.21
VPS50-213ENST00000477572 ZBTB6Q15916 424 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 ATP6V1FQ16864 119 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 IMPG1Q17R60 797 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 TMEM249Q2WGJ8 235 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 CCDC58Q4VC31 144 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 BRMS1LQ5PSV4 323 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 SPNS3Q6ZMD2 512 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 LINC00596Q86U02 117 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 CPNE9Q8IYJ1 553 aa1.25□□□□□ -2.21
VPS50-213ENST00000477572 HS3ST5Q8IZT8 346 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms