RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 UNKLQ9H9P5 680 aaKnown RBP6.75□□□□□ -1.33
HDAC6-221ENST00000477561 FBLN5Q9UBX5 448 aa6.75□□□□□ -1.33
HDAC6-221ENST00000477561 SH2D1BO14796 132 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 LDLRAD4O15165 306 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 CTDSPLO15194 276 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 XRCC3O43542 346 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 KDM4BO94953 1096 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF728P0DKX0 622 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 PTGFRP43088 359 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 OR3A1P47881 315 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 OR3A4PP47883 348 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 INPP1P49441 399 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 RAG2P55895 527 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 DLX6P56179 175 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZP1P60852 638 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 MRPS10P82664 201 aaKnown RBP6.74□□□□□ -1.33
HDAC6-221ENST00000477561 RELBQ01201 579 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF146Q15072 292 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF79Q15937 498 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 TAF9Q16594 264 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 HACD4Q5VWC8 232 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 TRIQKQ629K1 86 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 TMEM86BQ8N661 226 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZSCAN4Q8NAM6 433 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-221ENST00000477561 PXT1Q8NFP0 134 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 OR10K1Q8NGX5 313 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 FAM46BQ96A09 425 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 URM1Q9BTM9 101 aaKnown RBP6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF747Q9BV97 191 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 METTL9Q9H1A3 318 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ATG5Q9H1Y0 275 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 DPAGT1Q9H3H5 408 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 HEXA-AS1Q9H8Q6 139 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ABCB10Q9NRK6 738 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ING3Q9NXR8 418 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 C1RLQ9NZP8 487 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ZNRD1Q9P1U0 126 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 GLS2Q9UI32 602 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 ING4Q9UNL4 249 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 POMT1Q9Y6A1 747 aa6.74□□□□□ -1.33
HDAC6-221ENST00000477561 hCG_1809904A0A1W2PP81 198 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 A0A1W2PPE2 198 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 A0A1W2PR64 198 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 A0A1W2PRV1 198 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 BTBD17A6NE02 478 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 C17orf98A8MV24 154 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 TMEM14DPA8MWL7 114 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 DEGS1O15121 323 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 CRTAPO75718 401 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-221ENST00000477561 OR2H2O95918 312 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
HDAC6-221ENST00000477561 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF44P15621 663 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 CDK2P24941 298 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 LGALS4P56470 323 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 TAS2R20P59543 309 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 AESQ08117 197 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 SRSF4Q08170 494 aaKnown RBP6.73□□□□□ -1.33
HDAC6-221ENST00000477561 LY6EQ16553 131 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 RGS21Q2M5E4 152 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 PLA1AQ53H76 456 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 SPIN3Q5JUX0 258 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 TCF23Q7RTU1 214 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 LHFPL4Q7Z7J7 247 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 TRAPPC6BQ86SZ2 158 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 SAXO1Q8IYX7 474 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 Q8N402 240 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 MINDY2Q8NBR6 621 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 SETD6Q8TBK2 473 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 DYRK2Q92630 601 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 AJUBAQ96IF1 538 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 ZNF714Q96N38 554 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 SSX3Q99909 188 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 TMEM59Q9BXS4 323 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 PPA2Q9H2U2 334 aa6.73□□□□□ -1.33
HDAC6-221ENST00000477561 MRPS7Q9Y2R9 242 aaKnown RBP6.73□□□□□ -1.33
HDAC6-221ENST00000477561 hADV38S2A0JD32 116 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 H3BUX3 64 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 HSPB6O14558 160 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MGST3O14880 152 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 GSTZ1O43708 216 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MMP23AO75900 390 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 HTR3BO95264 441 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MPIG6BO95866 241 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 ARG1P05089 322 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 IGHV1-8P0DP01 117 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 IL7P13232 177 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 GTF2F2P13984 249 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 GLIPR1P48060 266 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 RAB13P51153 203 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 EFNB2P52799 333 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 QRFPP83859 136 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MEF2CQ06413 473 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 ATXN7L3Q14CW9 347 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-221ENST00000477561 ARL6IP1Q15041 203 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 RSU1Q15404 277 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 SLC22A6Q4U2R8 563 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 MIDNQ504T8 468 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 STEAP3Q658P3 488 aa6.72□□□□□ -1.33
HDAC6-221ENST00000477561 Q6P435 159 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms