RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 B4GALNT1Q00973 533 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 FUT5Q11128 374 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF154Q13106 437 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MSMO1Q15800 293 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 BATFQ16520 125 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ACKR1Q16570 336 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF74Q16587 644 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PCK2Q16822 640 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ANKRD55Q3KP44 614 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PLAC9Q5JTB6 97 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 LINC01590Q5TEZ4 76 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PRAMEF20Q5VT98 475 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SAMD13Q5VXD3 122 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MEX3BQ6ZN04 569 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 Q6ZN92 141 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TMEM182Q6ZP80 229 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 DPY19L4Q7Z388 723 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NRSN1Q8IZ57 195 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CMTM1Q8IZ96 169 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CFAP52Q8N1V2 620 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TMEM217Q8N7C4 229 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CCDC71LQ8N9Z2 235 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CHST4Q8NCG5 386 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 OR52R1Q8NGF1 315 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 OR52L2PQ8NGH6 319 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 KCNG3Q8TAE7 436 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF519Q8TB69 540 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF480Q8WV37 535 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 FAM3CQ92520 227 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 DPF1Q92782 380 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 WBP2Q969T9 261 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ARRDC3Q96B67 414 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SDSLQ96GA7 329 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TAAR6Q96RI8 345 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 SMAD5Q99717 465 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RARRES2Q99969 163 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PMCHL2Q9BQD1 86 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RTBDNQ9BSG5 229 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 RPP25Q9BUL9 199 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PLA2G2FQ9BZM2 168 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MANBALQ9NQG1 85 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MRPL22Q9NWU5 206 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF319Q9P2F9 582 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 WNT16Q9UBV4 365 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 PEF1Q9UBV8 284 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CLN8Q9UBY8 286 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 MRM2Q9UI43 246 aaKnown RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 CD84Q9UIB8 345 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 NPIPA1Q9UND3 350 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 GPR34Q9UPC5 381 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 LRP12Q9Y561 859 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TRAPPC1Q9Y5R8 145 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 IER3IP1Q9Y5U9 82 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 LIPGQ9Y5X9 500 aa4.06□□□□□ -1.76
PTCD3-212ENST00000477520 KIF26AQ9ULI4 1882 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-212ENST00000477520 TICRRQ7Z2Z1 1910 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 COL6A3P12111 3177 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 A0A087WV62 115 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 A0A0B4J2E0 115 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 SERTM2A0A1B0GWG4 89 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 A0A1B0GX12 115 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 IGLC7A0M8Q6 106 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MEIS3P1A6NDR6 274 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 HS3ST1O14792 307 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 NDUFS4O43181 175 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 CD5LO43866 347 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF253O75346 499 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 C1QL1O75973 258 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 KLF8O95600 359 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MT-CO2P00403 227 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 IFNA5P01569 189 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 NGFRP08138 427 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 F3P13726 295 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 HOXB2P14652 356 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF10P21506 573 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-212ENST00000477520 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 CD1BP29016 333 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 TSPOP30536 169 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 CCKBRP32239 447 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MC5RP33032 325 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MDH2P40926 338 aaKnown RBP4.05□□□□□ -1.76
PTCD3-212ENST00000477520 GRK6P43250 576 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 TNFRSF4P43489 277 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 SLC6A8P48029 635 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 PPOXP50336 477 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 EMP2P54851 167 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 UCP3P55916 312 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 RAB38P57729 211 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MMDQ15546 238 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 MLF2Q15773 248 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-212ENST00000477520 C5orf64Q2M2E5 130 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 GAGE13Q4V321 117 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 TCTEX1D4Q5JR98 221 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 OR10J3Q5JRS4 329 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 LDLRAD2Q5SZI1 272 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 STPG1Q5TH74 334 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 RAET1LQ5VY80 246 aa4.05□□□□□ -1.76
PTCD3-212ENST00000477520 WDR25Q64LD2 544 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-212ENST00000477520 SLC18B1Q6NT16 456 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms