RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CST7O76096 145 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 PPYP01298 95 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 VDAC1P21796 283 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 AADACP22760 399 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 OR10J1P30954 320 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 SRP14P37108 136 aaKnown RBP13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 P2RY6Q15077 328 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 THNSL2Q86YJ6 484 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 KMT2EQ8IZD2 1858 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 R4GN57 208 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TP53I11O14683 189 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 KBTBD11O94819 623 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 OR4A8P0C604 315 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 CDAP32320 146 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 RRADP55042 308 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 CCL7P80098 99 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 SERF2P84101 59 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM241Q24JQ0 296 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TEX38Q6PEX7 206 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 ASCL4Q6XD76 172 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 SIGLEC12Q96PQ1 595 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 IMMP2LQ96T52 175 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 SMIM7Q9BQ49 75 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 PRSS50Q9UI38 385 aa13.15□□□□□ -0.3
CLSTN1-205ENST00000477264 TMEM250H0YL14 139 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 ADAM20O43506 726 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 ANOS1P23352 680 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF154Q13106 437 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 ADIRFQ15847 76 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 HIST3H3Q16695 136 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 TMEM211Q6ICI0 200 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 FRYLO94915 3013 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 TLX3O43711 291 aaPredicted RBP13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 SLC25A6P12236 298 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 OR3A1P47881 315 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 MRGPRX4Q96LA9 322 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 OR51I2Q9H344 312 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 FGF21Q9NSA1 209 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 NAGKQ9UJ70 344 aa13.14□□□□□ -0.31
CLSTN1-205ENST00000477264 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 GLI4P10075 376 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 Q6ZS49 121 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 LHFPL2Q6ZUX7 228 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 OR1L3Q8NH93 324 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RELTQ969Z4 430 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 MAGT1Q9H0U3 335 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 ATXN7O15265 892 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 MSR1P21757 451 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 TUBG1P23258 451 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 OTX1P32242 354 aaPredicted RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 HIST1H3AP68431 136 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 LCN2P80188 198 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 OXGR1Q96P68 337 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RPRMQ9NS64 109 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 MRPS18CQ9Y3D5 142 aaKnown RBP13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
CLSTN1-205ENST00000477264 E9PLN8 166 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 PDCD6O75340 191 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 MSX1P28360 303 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 MDH2P40926 338 aaKnown RBP13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 PCP4P48539 62 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 MYBPHQ13203 477 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 CYB5R2Q6BCY4 276 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 OR5D13Q8NGL4 314 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms