RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BOD1Q96IK1 185 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 TAAR6Q96RI8 345 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 SLC25A31Q9H0C2 315 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 TREM2Q9NZC2 230 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 FAM96BQ9Y3D0 163 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 APC2O95996 2303 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 BSNQ9UPA5 3926 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 TRAV24A0A0B4J272 114 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 IGKV1D-13A0A0B4J2D9 117 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 IGKV1-6A0A0C4DH72 117 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 H0Y980 276 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 HSPB6O14558 160 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 TSPAN15O95858 294 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 IGKV1-13P0DP09 117 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 CA6P23280 308 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 UCP2P55851 309 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 EWSR1Q01844 656 aaKnown RBP eCLIP14□□□□□ -0.17
TMEM53-208ENST00000476724 NHLH2Q02577 135 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF266Q14584 549 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 HMGN3Q15651 99 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 ZADH2Q8N4Q0 377 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 BSCL2Q96G97 398 aaPredicted RBP14□□□□□ -0.17
TMEM53-208ENST00000476724 KIRREL1Q96J84 757 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 PLEKHF2Q9H8W4 249 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 CCL28Q9NRJ3 127 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 OR2W1Q9Y3N9 320 aa14□□□□□ -0.17
TMEM53-208ENST00000476724 LRP5LA4QPB2 252 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 ATP6V1G2-DDX39BF2Z307 99 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 HS3ST1O14792 307 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 DEGS1O15121 323 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 LILRA1O75019 489 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 WNT2P09544 360 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 SFTA3P0C7M3 94 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 HLA-DRB3P79483 266 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 CLEC9AQ6UXN8 241 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 P4HA3Q7Z4N8 544 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 OR10J5Q8NHC4 309 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 CABLES2Q9BTV7 478 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 POLDIP2Q9Y2S7 368 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 NPIPB11E5RHQ5 1161 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 H7C2Y5 167 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 HSD17B6O14756 317 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 PGLYRP1O75594 196 aaPredicted RBP13.99□□□□□ -0.17
TMEM53-208ENST00000476724 CD80P33681 288 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 NMSQ5H8A3 153 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 IGFL3Q6UXB1 125 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 MOB1BQ7L9L4 216 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 RDH5Q92781 318 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 CACFD1Q9UGQ2 172 aa13.99□□□□□ -0.17
TMEM53-208ENST00000476724 ARID1AO14497 2285 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 DOCK7Q96N67 2140 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 HEXAP06865 529 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 SNCAP37840 140 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 CAMLGP49069 296 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 VAMP2P63027 116 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 FLI1Q01543 452 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 ID3Q02535 119 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 PEA15Q15121 130 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 SHEQ5VZ18 495 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF324BQ6AW86 544 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 LILRB1Q8NHL6 650 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF488Q96MN9 340 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 LYRM2Q9NU23 88 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-208ENST00000476724 KPTNQ9Y664 436 aa13.98□□□□□ -0.17
TMEM53-208ENST00000476724 ADAM20O43506 726 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 OR8U9P0C7N5 309 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 F2RP25116 425 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 UBE2NP61088 152 aaKnown RBP13.97□□□□□ -0.17
TMEM53-208ENST00000476724 Q6P435 159 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 C20orf204Q6ZNR8 217 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 OR8U1Q8NH10 309 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 CDH20Q9HBT6 801 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 BOD1L1Q8NFC6 3051 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 PRRC2CQ9Y520 2896 aaKnown RBP13.97□□□□□ -0.17
TMEM53-208ENST00000476724 DMXL2Q8TDJ6 3036 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 FAM24AA6NFZ4 105 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 FAM157AC9JC47 383 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 AGPAT2O15120 278 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 SMPD2O60906 423 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 PITX3O75364 302 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 SLC25A6P12236 298 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 HOXB1P14653 301 aaPredicted RBP13.97□□□□□ -0.17
TMEM53-208ENST00000476724 ZNF44P15621 663 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 EIF2S3P41091 472 aaKnown RBP13.97□□□□□ -0.17
TMEM53-208ENST00000476724 PPP1CBP62140 327 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 POLR2GP62487 172 aaKnown RBP eCLIP13.97□□□□□ -0.17
TMEM53-208ENST00000476724 C5orf24Q7Z6I8 188 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 SPACA3Q8IXA5 215 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 WNT2BQ93097 391 aa13.97□□□□□ -0.17
TMEM53-208ENST00000476724 RHBDL1O75783 438 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 RAC2P15153 192 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 SELEP16581 610 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 NPBWR1P48145 328 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 BAXQ07812 192 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 MIDNQ504T8 468 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms