RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 PLEKHA2Q9HB19 425 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 ALKBH4Q9NXW9 302 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 B3GALT5Q9Y2C3 310 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 COL27A1Q8IZC6 1860 aaPredicted RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 A0A1B0GX78 115 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 CST7O76096 145 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 OR5AC1P0C628 307 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 CD38P28907 300 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 RRADP55042 308 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 MLF1P58340 268 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 RBX1P62877 108 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 OR5I1Q13606 314 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SP5Q6BEB4 398 aaPredicted RBP7.24□□□□□ -1.25
VAPB-205ENST00000476395 SYT13Q7L8C5 426 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 LHFPL4Q7Z7J7 247 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 GCNT2Q8N0V5 402 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 OR11L1Q8NGX0 322 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 GNG13Q9P2W3 67 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 SLC7A11Q9UPY5 501 aa7.24□□□□□ -1.25
VAPB-205ENST00000476395 IGKV1-27A0A075B6S5 117 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 TRAV34A0A0B4J273 112 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 A0A1W2PNR3 127 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 A0A1W2PR80 420 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 TGOLN2O43493 480 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 CTSSP25774 331 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 NXPH1P58417 271 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 FXYD4P59646 89 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 BRICD5Q6PL45 260 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ZNF66Q6ZN08 573 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 MAML2Q8IZL2 1156 aaPredicted RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 AKIRIN1Q9H9L7 192 aaPredicted RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 GPR173Q9NS66 373 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 LRFN1Q9P244 771 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 LAMP3Q9UQV4 416 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ZNF878C9JN71 531 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 M0R296 226 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ZNF43P17038 809 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 NTF4P34130 210 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 RPL23AP62750 156 aaKnown RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 HLA-DRB3P79483 266 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ENDOGQ14249 297 aaKnown RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 OR10G3Q8NGC4 313 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 OR5L1Q8NGL2 311 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 SDSLQ96GA7 329 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 PECRQ9BY49 303 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 C1orf123Q9NWV4 160 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 MEMO1Q9Y316 297 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 V9GYS6 101 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 A0A087WWC5 75 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 NSG1A0A0A6YYJ2 146 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 LY6G6EA0A0G2JKS1 128 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 IGSF23A1L1A6 192 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 RPLP1P05386 114 aaKnown RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 CHRM2P08172 466 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 CD27P26842 260 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 OTX1P32242 354 aaPredicted RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 ERVFC1-1P60608 527 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 HIST1H3AP68431 136 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 H3F3AP84243 136 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 DNLZQ5SXM8 178 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 PRAMEF5Q5TYX0 476 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 PRAMEF6Q5VXH4 476 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 FAM90A2PQ658T7 463 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ABHD12BQ7Z5M8 362 aaPredicted RBP7.23□□□□□ -1.25
VAPB-205ENST00000476395 COMMD2Q86X83 199 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 ZNF665Q9H7R5 613 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 CDH20Q9HBT6 801 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 PROK2Q9HC23 129 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 TUBD1Q9UJT1 453 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 FUT9Q9Y231 359 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 U3KQA8 63 aa7.23□□□□□ -1.25
VAPB-205ENST00000476395 SIAH2O43255 324 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 DFFBO76075 338 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 SRFP11831 508 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 CEACAM8P31997 349 aaPredicted RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 PRSS12P56730 875 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 FOXL2NBQ6ZUU3 175 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 TMEM256Q8N2U0 113 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 DNASE2BQ8WZ79 361 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 ZNF837Q96EG3 531 aaPredicted RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 RCC1LQ96I51 464 aaKnown RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 C11orf1Q9H5F2 150 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 NXT1Q9UKK6 140 aaKnown RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 GPR137BO60478 399 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 OPRM1P35372 400 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 CSNK1A1P48729 337 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 TNFSF10P50591 281 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 ZNF133P52736 654 aaPredicted RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 SUMO3P55854 103 aaPredicted RBP7.22□□□□□ -1.25
VAPB-205ENST00000476395 PIGPP57054 158 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 EWSR1Q01844 656 aaKnown RBP eCLIP7.22□□□□□ -1.25
VAPB-205ENST00000476395 SSX7Q7RTT5 188 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 C6orf201Q7Z4U5 140 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 ODF3L1Q8IXM7 274 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 FADS6Q8N9I5 356 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 OR2M3Q8NG83 312 aa7.22□□□□□ -1.25
VAPB-205ENST00000476395 OR13D1Q8NGV5 346 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms