RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TBPL2Q6SJ96 375 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 OR1S1Q8NH92 325 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 NAT6Q93015 286 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 ISG20Q96AZ6 181 aaKnown RBP2.43□□□□□ -2.02
PTCD3-211ENST00000476215 UBE2E2Q96LR5 201 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 SHANK2-AS3Q9BTD1 123 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 ANGPTL4Q9BY76 406 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 TMEM100Q9NV29 134 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 CES1P1Q9UKY3 287 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 FADS3Q9Y5Q0 445 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 SHROOM3Q8TF72 1996 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 COL12A1Q99715 3063 aa2.43□□□□□ -2.02
PTCD3-211ENST00000476215 PTPRQQ9UMZ3 2332 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 TLN1Q9Y490 2541 aaKnown RBP2.42□□□□□ -2.02
PTCD3-211ENST00000476215 MAST4O15021 2626 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 A0A0B4J2E0 115 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 F8VZ95 297 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 LINC01619G3V211 115 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 H3BN98 237 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 MYL12BO14950 172 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 UPK1BO75841 260 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 MMP7P09237 267 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-211ENST00000476215 GIMD1P0DJR0 217 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 RALBP11234 206 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SDC4P31431 198 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 ERFP50548 548 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 CLDN6P56747 220 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 BAMBIQ13145 260 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SYCP1Q15431 976 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 HES3Q5TGS1 186 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 MLIPQ5VWP3 458 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 C22orf39Q6P5X5 142 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 PHF13Q86YI8 300 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-211ENST00000476215 UMODL1-AS1Q8N2C9 162 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 WDR31Q8NA23 367 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 PROKR2Q8NFJ6 384 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 OR4C6Q8NH72 309 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 JOSD2Q8TAC2 188 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SFXN5Q8TD22 340 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 FAM172AQ8WUF8 416 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 PIH1D2Q8WWB5 315 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 CERS2Q96G23 380 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SNF8Q96H20 258 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 KLF6Q99612 283 aaPredicted RBP2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SEC22CQ9BRL7 303 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 PRORYQ9H606 182 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 CHRAC1Q9NRG0 131 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 OR51B2Q9Y5P1 312 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 U3KQA8 63 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 CENPEQ02224 2701 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SPTA1P02549 2419 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 SVILO95425 2214 aa2.42□□□□□ -2.02
PTCD3-211ENST00000476215 UTP20O75691 2785 aaKnown RBP2.42□□□□□ -2.02
PTCD3-211ENST00000476215 PTPRBP23467 1997 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 HECTD1Q9ULT8 2610 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 TRPM6Q9BX84 2022 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 BSNQ9UPA5 3926 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 NBPF19A0A087WUL8 3843 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 ZNF99A8MXY4 864 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 AQP9O43315 295 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 LCA5LO95447 670 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 CALB1P05937 261 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 GP1BAP07359 652 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 CCDC172P0C7W6 258 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 GZMAP12544 262 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 PMCHP20382 165 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 CD34P28906 385 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 PRSS3P35030 304 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 CLDN8P56748 225 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 PAFAH1B2P68402 229 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 MYL5Q02045 173 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 KLHL40Q2TBA0 621 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 DEFB133Q30KQ1 61 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 HIKESHIQ53FT3 197 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 TTC19Q6DKK2 380 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 DCUN1D2Q6PH85 259 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 DAZ4Q86SG3 579 aaKnown RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 OR6K2Q8NGY2 324 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 OR52N1Q8NH53 320 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 LMX1AQ8TE12 382 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 PEX13Q92968 403 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 Q96MT0 163 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 NAPGQ99747 312 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 TM6SF2Q9BZW4 377 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 TCEAL2Q9H3H9 227 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 LRRC19Q9H756 370 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 DAZ1Q9NQZ3 744 aaKnown RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 PARVAQ9NVD7 372 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 RAB22AQ9UL26 194 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 RHBDD3Q9Y3P4 386 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 AHCTF1Q8WYP5 2266 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 SPENQ96T58 3664 aaKnown RBP2.41□□□□□ -2.02
PTCD3-211ENST00000476215 NAV2Q8IVL1 2488 aa2.41□□□□□ -2.02
PTCD3-211ENST00000476215 UBR5O95071 2799 aaPredicted RBP2.4□□□□□ -2.02
PTCD3-211ENST00000476215 RP1L1Q8IWN7 2480 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-211ENST00000476215 LOC102724200A0A096LPH7 203 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms