RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SDK1Q7Z5N4 2213 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 H0YJW9 148 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 HLA-DQB2P05538 268 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 UBE2MP61081 183 aaKnown RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 UBA52P62987 128 aaKnown RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 LPAL2Q16609 132 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 KHDC1LQ5JSQ8 128 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 NIPAL3Q6P499 406 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 OPN5Q6U736 354 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 ZNF788Q6ZQV5 615 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 FGF13Q92913 245 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SMIM19Q96E16 107 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 KIRREL1Q96J84 757 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SPAG8Q99932 426 aaPredicted RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SYT4Q9H2B2 425 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 CYTL1Q9NRR1 136 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 IDI2-AS1Q9NZ38 188 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 RAB27BO00194 218 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 KBTBD11O94819 623 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 LINC00032P0C843 101 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 IGLC2P0DOY2 106 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 IGLC3P0DOY3 106 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 DEFB103AP81534 67 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 PSG4Q00888 419 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 ALG10Q5BKT4 473 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 Q6ZVL8 140 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 ZADH2Q8N4Q0 377 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 OR56B4Q8NH76 319 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 OR4A5Q8NH83 315 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 TWIST2Q8WVJ9 160 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 NEUROG1Q92886 237 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 DNAJC27Q9NZQ0 273 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 OBSL1O75147 1896 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 LY6LH3BQJ8 138 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 J3KTA2 159 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 NUPR1O60356 82 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 TOX4O94842 621 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SLC2A5P22732 501 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 CX3CR1P49238 355 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 MEF2CQ06413 473 aaPredicted RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 ZNF154Q13106 437 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 POU2AF1Q16633 256 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SLC25A47Q6Q0C1 308 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 TIFABQ6ZNK6 161 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 METTL27Q8N6F8 245 aaPredicted RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 SYT8Q8NBV8 401 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 AJUBAQ96IF1 538 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 CIB3Q96Q77 187 aaPredicted RBP4.16□□□□□ -1.74
NPHP3-206ENST00000474871 CST11Q9H112 138 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 TBC1D17Q9HA65 648 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 ENY2Q9NPA8 101 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 MED29Q9NX70 200 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 KIAA1456Q9P272 454 aa4.16□□□□□ -1.74
NPHP3-206ENST00000474871 TNFRSF11BO00300 401 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TPST2O60704 377 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 ENTPD6O75354 484 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 PTHP01270 115 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 EPCAMP16422 314 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 HMGA1P17096 107 aaKnown RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 PJVKQ0ZLH3 352 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 C1orf61Q13536 156 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 RHEBQ15382 184 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 OR8B8Q15620 311 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 IQCJQ1A5X6 159 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 FFAR4Q5NUL3 377 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TMEM69Q5SWH9 247 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 AMMECR1LQ6DCA0 310 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 PLAG1Q6DJT9 500 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 NUDT8Q8WV74 236 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 DYRK2Q92630 601 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TMEM106AQ96A25 262 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 BORCS8Q96FH0 119 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 DUX3Q96PT4 197 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 FAM234AQ9H0X4 552 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 FNDC4Q9H6D8 234 aaPredicted RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TMEM9BQ9NQ34 198 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 JKAMPQ9P055 326 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 A0A0B4J2E0 115 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 A0A1B0GX12 115 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TMEM235A6NFC5 223 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 OR51F1A6NGY5 319 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 GABRPO00591 440 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 STC2O76061 302 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 MT-CO3P00414 261 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 PPIFP30405 207 aaKnown RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 SLC25A1P53007 311 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 RPL15P61313 204 aaKnown RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 EIF5AP63241 154 aaKnown RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 SELENOWP63302 87 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 PSG9Q00887 426 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 ZNF345Q14585 488 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TMEM200BQ69YZ2 307 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 KCTD18Q6PI47 426 aaPredicted RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 DEFB125Q8N687 156 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 ZNRF2Q8NHG8 242 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 MSI2Q96DH6 328 aaKnown RBP4.15□□□□□ -1.74
NPHP3-206ENST00000474871 TP53TG3Q9ULZ0 132 aa4.15□□□□□ -1.74
NPHP3-206ENST00000474871 KIR2DS1A0A191URI9 304 aa4.15□□□□□ -1.75
NPHP3-206ENST00000474871 TINCRA0A1B0GVN0 87 aa4.15□□□□□ -1.75
NPHP3-206ENST00000474871 C1orf226A1L170 272 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms