RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ENDOGQ14249 297 aaKnown RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF573Q86YE8 665 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 OSR2Q8N2R0 312 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 MRPS18CQ9Y3D5 142 aaKnown RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 H3BMH7 237 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 TOX3O15405 576 aaPredicted RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 KBTBD11O94819 623 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 CRYABP02511 175 aaKnown RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF41P51814 821 aaPredicted RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 TLE1Q04724 770 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 PLPPR5Q32ZL2 321 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 FAM180AQ6UWF9 173 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 RPUSD4Q96CM3 377 aaKnown RBP16■□□□□ 0.15
ECHDC1-214ENST00000474289 OXGR1Q96P68 337 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 NAGKQ9UJ70 344 aa16■□□□□ 0.15
ECHDC1-214ENST00000474289 DUXBA0A1W2PPF3 345 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 M0QZK8 103 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 GGCTO75223 188 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 UCP1P25874 307 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 MDH2P40926 338 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 OR8B8Q15620 311 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 SHISA6Q6ZSJ9 500 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 SCGB1C1Q8TD33 95 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 MRGPRX4Q96LA9 322 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 PLSCR2Q9NRY7 297 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 OR6C3Q9NZP0 311 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 MYO9BQ13459 2157 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 MAP1LC3B2A6NCE7 125 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 PDCD6O75340 191 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF737O75373 536 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF705AQ6ZN79 300 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 MAP1LC3BQ9GZQ8 125 aa15.99■□□□□ 0.15
ECHDC1-214ENST00000474289 IFNA1P01562 189 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 LINC00614P0C842 121 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 FBLP22087 321 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 WNT5AP41221 380 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 GUCA1AP43080 201 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 CNN1P51911 297 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 CLDN17P56750 224 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 MRPS11P82912 194 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 MEF2BQ02080 365 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 MALLQ13021 153 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 TMEM211Q6ICI0 200 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 ASCL4Q6XD76 172 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 BORCS8Q96FH0 119 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 OPN3Q9H1Y3 402 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF442Q9H7R0 627 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 RNF150Q9ULK6 438 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 A0A0G2JRQ6 117 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 TP53I11O14683 189 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 RPS18P62269 152 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 DLX2Q07687 328 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 WDR5BQ86VZ2 330 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 OR51I2Q9H344 312 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 KLRF1Q9NZS2 232 aa15.98■□□□□ 0.15
ECHDC1-214ENST00000474289 IGKV1D-13A0A0B4J2D9 117 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 IGKV1-13P0DP09 117 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 IRF2P14316 349 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 TCN2P20062 427 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 PHYHD1Q5SRE7 291 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 OR2T10Q8NGZ9 312 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 PSMG3Q9BT73 122 aaPredicted RBP15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 PLEK2Q9NYT0 353 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 HPRT1P00492 218 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 OR10J1P30954 320 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 FASLGP48023 281 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 CNN3Q15417 329 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 ACSF3Q4G176 576 aaPredicted RBP15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 LRP11Q86VZ4 500 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 PRR18Q8N4B5 295 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 PLK3Q9H4B4 646 aa15.97■□□□□ 0.15
ECHDC1-214ENST00000474289 A0A1B0GUS0 222 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 TYMSP04818 313 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ARL16Q0P5N6 197 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 SLC25A53Q5H9E4 307 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 CISD2Q8N5K1 135 aaKnown RBP15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 NABP1Q96AH0 204 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 PARLQ9H300 379 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 WDFY3Q8IZQ1 3526 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ASCC3Q8N3C0 2202 aaKnown RBP15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 HNRNPKP61978 463 aaKnown RBP eCLIP15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 DAZAP2Q15038 168 aaPredicted RBP15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 SHBQ15464 509 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ANKRD39Q53RE8 183 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 TMEM41BQ5BJD5 291 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ARSJQ5FYB0 599 aaPredicted RBP15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ZNF525Q8N782 197 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 DIRC2Q96SL1 478 aa15.96■□□□□ 0.15
ECHDC1-214ENST00000474289 ARHGAP21Q5T5U3 1957 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 SLC22A20A6NK97 555 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 TLX3O43711 291 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 OR7C1O76099 320 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 HIST1H3AP68431 136 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 SERF2P84101 59 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF92Q03936 586 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 LHFPL2Q6ZUX7 228 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 MRPL52Q86TS9 123 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 BATF2Q8N1L9 274 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 TMEM256Q8N2U0 113 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 LHX4Q969G2 390 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms