RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 UBALD1Q8TB05 177 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 CFHR4Q92496 578 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 MRPS24Q96EL2 167 aaKnown RBP14.36□□□□□ -0.11
UPF3A-203ENST00000474056 UQCC2Q9BRT2 126 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 SELENOIQ9C0D9 397 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 DUSP21Q9H596 190 aa14.36□□□□□ -0.11
UPF3A-203ENST00000474056 PLXNB1O43157 2135 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 A0A1W2PPE3 182 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 AIPO00170 330 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 SC5DO75845 299 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 ARHGDIBP52566 201 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 GPR50Q13585 617 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 DIAPH2-AS1Q14236 149 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 C2orf68Q2NKX9 166 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 RBM48Q5RL73 367 aaKnown RBP14.35□□□□□ -0.11
UPF3A-203ENST00000474056 LIPKQ5VXJ0 399 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 C16orf82Q7Z2V1 217 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 LRRTM1Q86UE6 522 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 UFD1Q92890 307 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 TOMM40LQ969M1 308 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 ARL11Q969Q4 196 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 RPEQ96AT9 228 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 Q96M66 194 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 SLC25A33Q9BSK2 321 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 VCX3BQ9H321 246 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 SPACA1Q9HBV2 294 aa14.35□□□□□ -0.11
UPF3A-203ENST00000474056 AMMECR1Q9Y4X0 333 aaPredicted RBP14.35□□□□□ -0.11
UPF3A-203ENST00000474056 OOSP1A8MZH6 123 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 MCRIP1C9JLW8 97 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 WIPF1O43516 503 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 RGS10O43665 173 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 MT-ND4P03905 459 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 CSF1P09603 554 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 GZMHP20718 246 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 CRHBPP24387 322 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 ARSJQ5FYB0 599 aaPredicted RBP14.34□□□□□ -0.11
UPF3A-203ENST00000474056 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 RAB12Q6IQ22 244 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 FAM53AQ6NSI3 398 aaPredicted RBP14.34□□□□□ -0.11
UPF3A-203ENST00000474056 CCDC144NLQ6NUI1 221 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 WIPF2Q8TF74 440 aaPredicted RBP14.34□□□□□ -0.11
UPF3A-203ENST00000474056 FAM46BQ96A09 425 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 ETAA1Q9NY74 926 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 PEX16Q9Y5Y5 336 aa14.34□□□□□ -0.11
UPF3A-203ENST00000474056 IGHV3-43A0A0B4J1X8 118 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 A0A1W2PPI3 338 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 H3BUI4 141 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 OR2F2O95006 317 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 HSMCR30P0CW71 290 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 IGHV3-43DP0DP04 118 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 MNDAP41218 407 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 VDAC2P45880 294 aaPredicted RBP14.33□□□□□ -0.12
UPF3A-203ENST00000474056 HSD17B12Q53GQ0 312 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 SYT6Q5T7P8 510 aaPredicted RBP14.33□□□□□ -0.12
UPF3A-203ENST00000474056 CEACAM19Q7Z692 300 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 OR4K15Q8NH41 348 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 FAM110DQ8TAY7 271 aaPredicted RBP14.33□□□□□ -0.12
UPF3A-203ENST00000474056 TMEM203Q969S6 136 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 RBM14Q96PK6 669 aaKnown RBP14.33□□□□□ -0.12
UPF3A-203ENST00000474056 WNT10AQ9GZT5 417 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 CCDC90BQ9GZT6 254 aa14.33□□□□□ -0.12
UPF3A-203ENST00000474056 SDCBPO00560 298 aaPredicted RBP14.32□□□□□ -0.12
UPF3A-203ENST00000474056 KCNAB3O43448 404 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 ORC5O43913 435 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 FBXO24O75426 580 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 MPIG6BO95866 241 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 UCHL1P09936 223 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 CD28P10747 220 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 SRMP19623 302 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 MAP2K4P45985 399 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 HSPA13P48723 471 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 LOXL3P58215 753 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 RPS25P62851 125 aaKnown RBP14.32□□□□□ -0.12
UPF3A-203ENST00000474056 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 GLT8D1Q68CQ7 371 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 OR10K2Q6IF99 312 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 SLC16A12Q6ZSM3 486 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 LYG1Q8N1E2 194 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 OR10X1Q8NGY0 326 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 OR56B4Q8NH76 319 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 CAPSLQ8WWF8 208 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 PHYHIPQ92561 330 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 CNBD2Q96M20 576 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 KCNK15Q9H427 330 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 GFOD1Q9NXC2 390 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms