RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 POM121L2Q96KW2 1035 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF75AQ96N20 296 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 TSNAXQ99598 290 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 HDHD3Q9BSH5 251 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 HES7Q9BYE0 225 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 REG4Q9BYZ8 158 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC25A31Q9H0C2 315 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 NARFLQ9H6Q4 476 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2S2Q9NQN1 319 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 MMP26Q9NRE1 261 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC2A9Q9NRM0 540 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM212BQ9NTI7 297 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 POMT1Q9Y6A1 747 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF318Q5VUA4 2279 aa5.02□□□□□ -1.61
ATPAF1-204ENST00000474020 MAST4O15021 2626 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ACACBO00763 2458 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TRBV6-6A0A0A6YYG2 114 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 C3orf85A0A1B0GTC6 90 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TSPAN4O14817 238 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MPPED1O15442 326 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 HSPA12AO43301 675 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MED6O75586 246 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ATG12O94817 140 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 SNAPINO95295 136 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 APOC3P02656 99 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 OR5AC1P0C628 307 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 FTH1P19P0C7X4 201 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 HKR1P10072 659 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MMP9P14780 707 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF44P15621 663 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF250P15622 560 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 AADACP22760 399 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ANOS1P23352 680 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 GNRHRP30968 328 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TNFSF10P50591 281 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RAB5CP51148 216 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 F2RL1P55085 397 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RAB2AP61019 212 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 PPP1CBP62140 327 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF266Q14584 549 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM187Q14656 261 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 HMGN3Q15651 99 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 EIF2S3LQ2VIR3 472 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM76BQ5HYJ3 339 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 C1QTNF12Q5T7M4 302 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 INO80CQ6PI98 192 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MEX3BQ6ZN04 569 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RTN4RL2Q86UN3 420 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MDP1Q86V88 176 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM58AQ8N1B3 248 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZADH2Q8N4Q0 377 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF610Q8N9Z0 462 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 C1orf162Q8NEQ5 155 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 Q8NFD4 153 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 OR4A4PQ8NGN8 299 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 OR10J5Q8NHC4 309 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 SECTM1Q8WVN6 248 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TMED6Q8WW62 240 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 BCL2L2Q92843 193 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 IL22RA2Q969J5 263 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 MRPL24Q96A35 216 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 WBP1Q96G27 269 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 WDYHV1Q96HA8 205 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 OR10C1Q96KK4 312 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 LINC00052Q96N35 136 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RNF126Q9BV68 326 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 WDR13Q9H1Z4 485 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZDHHC11Q9H8X9 412 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 Q9N2K0 584 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 TREM1Q9NP99 234 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 OBP2BQ9NPH6 170 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 KCNIP1Q9NZI2 227 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 LUZP4Q9P127 313 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RCC2Q9P258 522 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 STRAPQ9Y3F4 350 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 RBM7Q9Y580 266 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 PTPRZ1P23471 2315 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF292O60281 2723 aa5.01□□□□□ -1.61
ATPAF1-204ENST00000474020 NCOR2Q9Y618 2525 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 GPR179Q6PRD1 2367 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 IGKV1D-8A0A087WSZ0 117 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 OVOL3O00110 214 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 SH2D1BO14796 132 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 FGF16O43320 207 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 NXPH2O95156 264 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 SERPINE2P07093 398 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 CCL2P13500 99 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 RPS2P15880 293 aaKnown RBP5□□□□□ -1.61
ATPAF1-204ENST00000474020 GCH1P30793 250 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 NKX2-1P43699 371 aaPredicted RBP5□□□□□ -1.61
ATPAF1-204ENST00000474020 CAMLGP49069 296 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 CCL11P51671 97 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 HLA-DRB3P79483 266 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 CD69Q07108 199 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 PJVKQ0ZLH3 352 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 TGIF1Q15583 401 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 OR8G1Q15617 311 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 C3AR1Q16581 482 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 HIKESHIQ53FT3 197 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms