RNA–Protein interactions for RNA: ENST00000473330.1

FSCN1-205, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 2

Gene FSCN1, Length 2,215 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-205ENST00000473330 RPL23AP62750 156 aaKnown RBP17.48■□□□□ 0.39
FSCN1-205ENST00000473330 Q0VFX4 171 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 DPPA3Q6W0C5 159 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 P4HA3Q7Z4N8 544 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 ZNF295-AS1Q8N0V1 137 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 NEK7Q8TDX7 302 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 DEPPQ9NTK1 212 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 TGIF2-C20orf24A0A0A6YYL0 155 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 CTXN2P0C2S0 81 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 CEACAM21Q3KPI0 293 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 PCSK4Q6UW60 755 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 TDHQ8IZJ6 230 aa17.48■□□□□ 0.39
FSCN1-205ENST00000473330 CXorf65A6NEN9 183 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 HBE1P02100 147 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 GLIPR1P48060 266 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 RNPS1Q15287 305 aaKnown RBP17.47■□□□□ 0.39
FSCN1-205ENST00000473330 MPV17LQ2QL34 196 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 KHDC3LQ587J8 217 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 C20orf204Q6ZNR8 217 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 ZNF610Q8N9Z0 462 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 SIRT7Q9NRC8 400 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 TNRC6BQ9UPQ9 1833 aaKnown RBP17.47■□□□□ 0.39
FSCN1-205ENST00000473330 KIAA1324LA8MWY0 1029 aaPredicted RBP17.47■□□□□ 0.39
FSCN1-205ENST00000473330 H3BP45 60 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 F2RP25116 425 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 ARF1P84077 181 aaKnown RBP17.47■□□□□ 0.39
FSCN1-205ENST00000473330 OR8G1Q15617 311 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 SLC35E3Q7Z769 313 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 THNSL2Q86YJ6 484 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 ZDHHC23Q8IYP9 409 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 GPR146Q96CH1 333 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 PRDM6Q9NQX0 595 aa17.47■□□□□ 0.39
FSCN1-205ENST00000473330 A0A096LPE4 126 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 LOC102723971A0A1B0GUV8 181 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 A0A1W2PPZ6 126 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 PINLYPA6NC86 204 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 NRN1LQ496H8 165 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 PYY3Q5JQD4 70 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 C9orf135Q5VTT2 229 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 MRPL30Q8TCC3 161 aaKnown RBP17.46■□□□□ 0.39
FSCN1-205ENST00000473330 TMEM45BQ96B21 275 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 PILRBQ9UKJ0 227 aa17.46■□□□□ 0.39
FSCN1-205ENST00000473330 TRAV1-1A0A0B4J248 108 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 TRAPPC2LH3BP13 241 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 SYNGR1O43759 233 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 GFRA1P56159 465 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 PRRG4Q9BZD6 226 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 NOSIPQ9Y314 301 aaKnown RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 C5orf49A4QMS7 147 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 NTN3O00634 580 aaPredicted RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BKO60814 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 DFFBO76075 338 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BJP06899 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BOP23527 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 GDF1P27539 372 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BBP33778 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BDP58876 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BCP62807 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 ZFP36L1Q07352 338 aaKnown RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 TMEM267Q0VDI3 215 aaPredicted RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST2H2BEQ16778 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 ZNF324BQ6AW86 544 aaPredicted RBP17.45■□□□□ 0.38
FSCN1-205ENST00000473330 SPNS3Q6ZMD2 512 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 PPP1R32Q7Z5V6 425 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 STX12Q86Y82 276 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BHQ93079 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BNQ99877 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 HIST1H2BMQ99879 126 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 DMRT1Q9Y5R6 373 aa17.45■□□□□ 0.38
FSCN1-205ENST00000473330 MRPL33O75394 65 aaKnown RBP17.44■□□□□ 0.38
FSCN1-205ENST00000473330 HLA-HP01893 362 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 HLA-DRB3P79483 266 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 IZUMO4Q1ZYL8 232 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 MRPL21Q7Z2W9 205 aaKnown RBP17.44■□□□□ 0.38
FSCN1-205ENST00000473330 MKXQ8IYA7 352 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 OR10G4Q8NGN3 311 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 CYB5BO43169 146 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 PSG2P11465 335 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 LINC00469Q8N7U9 141 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 ZNF552Q9H707 407 aaPredicted RBP17.44■□□□□ 0.38
FSCN1-205ENST00000473330 GAR1Q9NY12 217 aaKnown RBP17.44■□□□□ 0.38
FSCN1-205ENST00000473330 GNG13Q9P2W3 67 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 OR2W1Q9Y3N9 320 aa17.44■□□□□ 0.38
FSCN1-205ENST00000473330 A0A1B0GU03 582 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 ZNF503-AS2A6NEH8 195 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 F10P00742 488 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 IFNA5P01569 189 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 OTX2P32243 289 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 FOXG1P55316 489 aaPredicted RBP17.43■□□□□ 0.38
FSCN1-205ENST00000473330 OR2B11Q5JQS5 317 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 FAM90A2PQ658T7 463 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 Q6ZRM9 215 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 OR51H1Q8NH63 302 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 ZNF488Q96MN9 340 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 MRPS18CQ9Y3D5 142 aaKnown RBP17.43■□□□□ 0.38
FSCN1-205ENST00000473330 TNRC6AQ8NDV7 1962 aaKnown RBP17.43■□□□□ 0.38
FSCN1-205ENST00000473330 CD200P41217 278 aa17.43■□□□□ 0.38
FSCN1-205ENST00000473330 TRA2AQ13595 282 aaKnown RBP eCLIP17.43■□□□□ 0.38
FSCN1-205ENST00000473330 H1FOOQ8IZA3 346 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms