RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 MEIKINA0A087WXM9 373 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 CD8AP01732 235 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 SCTP09683 121 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 OR4E1P0C645 316 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 PGAM2P15259 253 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 RCC1P18754 421 aaPredicted RBP10.71□□□□□ -0.69
VPS13D-205ENST00000473099 ANXA7P20073 488 aaKnown RBP10.71□□□□□ -0.69
VPS13D-205ENST00000473099 GZMHP20718 246 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 FCGR2CP31995 323 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 AESQ08117 197 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 CR1LQ2VPA4 569 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 TMEM128Q5BJH2 165 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF626Q68DY1 528 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 C20orf204Q6ZNR8 217 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 TMED4Q7Z7H5 227 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 OR10J5Q8NHC4 309 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 MRGPRFQ96AM1 343 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 MOB3AQ96BX8 217 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 ZNF486Q96H40 463 aaPredicted RBP10.71□□□□□ -0.69
VPS13D-205ENST00000473099 COQ2Q96H96 371 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 GAFA1Q96PS6 74 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 MAB21L2Q9Y586 359 aa10.71□□□□□ -0.69
VPS13D-205ENST00000473099 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-205ENST00000473099 TRBV6-7A0A0A0MS04 114 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 ODAMA1E959 279 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 OR5H14A6NHG9 310 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 SPINT2O43291 252 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 SSNA1O43805 119 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 CCNKO75909 580 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 PPYP01298 95 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 GYPAP02724 150 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-205ENST00000473099 SOD3P08294 240 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 NPY4RP50391 375 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 P2RX3P56373 397 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 TMEM30BQ3MIR4 351 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 IGSF11Q5DX21 431 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 SLC38A6Q8IZM9 456 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 MUC20Q8N307 709 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-205ENST00000473099 ZNF565Q8N9K5 539 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 DEFB108BQ8NET1 73 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 ZNF431Q8TF32 576 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-205ENST00000473099 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 GALMQ96C23 342 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 C14orf79Q96F83 325 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 KIRREL1Q96J84 757 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 UBTD1Q9HAC8 227 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 LPAR3Q9UBY5 353 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 NAV2Q8IVL1 2488 aa10.7□□□□□ -0.7
VPS13D-205ENST00000473099 BET1O15155 118 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 HSPA12AO43301 675 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 TUSC2O75896 110 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 VSIG10L2P0DP72 767 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 ZBTB25P24278 435 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 S100GP29377 79 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 IL2RGP31785 369 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 GLIPR1P48060 266 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 HOXA4Q00056 320 aaPredicted RBP10.69□□□□□ -0.7
VPS13D-205ENST00000473099 DHODHQ02127 395 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 HERPUD1Q15011 391 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 CARTPTQ16568 116 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 LYG2Q86SG7 212 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 H1FOOQ8IZA3 346 aaPredicted RBP10.69□□□□□ -0.7
VPS13D-205ENST00000473099 FAM185AQ8N0U4 392 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 CCDC71LQ8N9Z2 235 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 ZNRF1Q8ND25 227 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 TIMD4Q96H15 378 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 BEX2Q9BXY8 128 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 TOLLIPQ9H0E2 274 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 FXYD6Q9H0Q3 95 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 CLEC4MQ9H2X3 399 aaPredicted RBP10.69□□□□□ -0.7
VPS13D-205ENST00000473099 C5orf66Q9H5L9 145 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 BEX1Q9HBH7 125 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 ING3Q9NXR8 418 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 ZNF69Q9UC07 566 aa10.69□□□□□ -0.7
VPS13D-205ENST00000473099 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 TMPRSS2O15393 492 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 NDUFB3O43676 98 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
VPS13D-205ENST00000473099 HNRNPCP07910 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS13D-205ENST00000473099 AADACP22760 399 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 EDDM3BP56851 147 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 HTD2P86397 168 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
VPS13D-205ENST00000473099 DHRS2Q13268 280 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 EDDM3AQ14507 147 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 ABCA11PQ4W5N1 156 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 LRRC10Q5BKY1 277 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 SPICQ8N5J4 248 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 RAB1CQ92928 201 aa10.68□□□□□ -0.7
VPS13D-205ENST00000473099 NINJ1Q92982 152 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms