RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 OR8H3Q8N146 312 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 OR13C5Q8NGS8 318 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 GGHQ92820 318 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF184Q99676 751 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-203ENST00000472892 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
VTI1A-203ENST00000472892 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
VTI1A-203ENST00000472892 DNAH3Q8TD57 4116 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 A0A1W2PPE3 182 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 FGF16O43320 207 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 ORC5O43913 435 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 MT-ND4P03905 459 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 IGLL1P15814 213 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 SERPINA2P20848 420 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 LOXL3P58215 753 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-203ENST00000472892 MED21Q13503 144 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 EBI3Q14213 229 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 GPR176Q14439 515 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 HNF4GQ14541 408 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 SLC22A6Q4U2R8 563 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 PACRGLQ8N7B6 248 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 C8orf31Q8N9H6 132 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 SETD9Q8NE22 299 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 AURKAIP1Q9NWT8 199 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-203ENST00000472892 CKLFQ9UBR5 152 aa12.12□□□□□ -0.47
VTI1A-203ENST00000472892 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 A0A1W2PP11 408 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 MAGEA13PA6NCF6 341 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 PIN1P1O15428 100 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
VTI1A-203ENST00000472892 TMEM11P17152 192 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 FSTP19883 344 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 ST3GAL4Q11206 333 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 HES1Q14469 280 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 DHRSXQ8N5I4 330 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 LINC00311Q8N616 119 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 ZFP41Q8N8Y5 198 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 MRAPQ8TCY5 172 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 ARL11Q969Q4 196 aa12.11□□□□□ -0.47
VTI1A-203ENST00000472892 IGHV1-3A0A0C4DH29 117 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 SDCBPO00560 298 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-203ENST00000472892 HSD17B6O14756 317 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 PF4P02776 101 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 CDH26Q8IXH8 852 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 MRPS24Q96EL2 167 aaKnown RBP12.1□□□□□ -0.47
VTI1A-203ENST00000472892 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
VTI1A-203ENST00000472892 RCC2Q9P258 522 aaKnown RBP12.1□□□□□ -0.47
VTI1A-203ENST00000472892 A0A1W2PPK0 400 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 CCRL2O00421 344 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 IGHG2P01859 326 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 CD1AP06126 327 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 TAS2R43P59537 309 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 SLC35A2P78381 396 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 Q3ZCU0 254 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 LAIR2Q6ISS4 152 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 GLIPR1L1Q6UWM5 242 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 LYPD6Q86Y78 171 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 GAPTQ8N292 157 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 STX19Q8N4C7 294 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 Q8N6K4 173 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 MUL1Q969V5 352 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
VTI1A-203ENST00000472892 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
VTI1A-203ENST00000472892 OR14A2Q96R54 314 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 GFOD1Q9NXC2 390 aa12.09□□□□□ -0.47
VTI1A-203ENST00000472892 CNOT2Q9NZN8 540 aaKnown RBP12.09□□□□□ -0.47
VTI1A-203ENST00000472892 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
VTI1A-203ENST00000472892 MCRIP1C9JLW8 97 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 AIPO00170 330 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 DUS4LO95620 317 aaKnown RBP12.08□□□□□ -0.48
VTI1A-203ENST00000472892 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-203ENST00000472892 IZUMO1Q8IYV9 350 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 JAGN1Q8N5M9 183 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 FBLIM1Q8WUP2 373 aa12.08□□□□□ -0.48
VTI1A-203ENST00000472892 NOL4LQ96MY1 436 aaPredicted RBP12.08□□□□□ -0.48
VTI1A-203ENST00000472892 DERL3Q96Q80 235 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms