RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF491Q8N8L2 437 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 ZNF565Q8N9K5 539 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 CHST4Q8NCG5 386 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 OR10H4Q8NGA5 316 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 OR1N2Q8NGR9 330 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 CNIH3Q8TBE1 160 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 DCUN1D4Q92564 292 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 EME1Q96AY2 570 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 NRBF2Q96F24 287 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 LRGUKQ96M69 825 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 KCTD7Q96MP8 289 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 OR5B12Q96R08 314 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 NR1H4Q96RI1 486 aaPredicted RBP7.21□□□□□ -1.26
VCL-204ENST00000472585 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 THTPAQ9BU02 230 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 TEX12Q9BXU0 123 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 ALX4Q9H161 411 aaPredicted RBP7.21□□□□□ -1.26
VCL-204ENST00000472585 NCOR1P1Q9H4R4 102 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 MED4Q9NPJ6 270 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 TPSG1Q9NRR2 321 aa7.21□□□□□ -1.26
VCL-204ENST00000472585 WARS2Q9UGM6 360 aaKnown RBP7.21□□□□□ -1.26
VCL-204ENST00000472585 AMMECR1Q9Y4X0 333 aaPredicted RBP7.21□□□□□ -1.26
VCL-204ENST00000472585 MAGEA13PA6NCF6 341 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 OR4C45A6NMZ5 311 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 G3V318 75 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 SAP30O75446 220 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 DCTN3O75935 186 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 GAPDHP04406 335 aaKnown RBP7.2□□□□□ -1.26
VCL-204ENST00000472585 IGF1P05019 195 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 OR8U8P0C7N1 319 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 UBCP0CG48 685 aaKnown RBP7.2□□□□□ -1.26
VCL-204ENST00000472585 MNAT1P51948 309 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 BNIP1Q12981 228 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 ZSCAN26Q16670 478 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 PIGYQ3MUY2 71 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 HSP90B2PQ58FF3 399 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 TMEM244Q5VVB8 128 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 KDM4DQ6B0I6 523 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 ELP2Q6IA86 826 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 SATL1Q86VE3 508 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 Q8N1Y9 231 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 OR10K1Q8NGX5 313 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 OR2T10Q8NGZ9 312 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 RTN4IP1Q8WWV3 396 aaPredicted RBP7.2□□□□□ -1.26
VCL-204ENST00000472585 DLX4Q92988 240 aaPredicted RBP7.2□□□□□ -1.26
VCL-204ENST00000472585 SPSB1Q96BD6 273 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 ISYNA1Q9NPH2 558 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 GNG8Q9UK08 70 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 TNCP24821 2201 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 HERC2O95714 4834 aa7.2□□□□□ -1.26
VCL-204ENST00000472585 IGHV3-43A0A0B4J1X8 118 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 MPZL2O60487 215 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 IGHV3-43DP0DP04 118 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 TMEM225BP0DP42 221 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 ZNF20P17024 532 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 CNTFRP26992 372 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 CD1BP29016 333 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 C21orf33P30042 268 aaPredicted RBP7.19□□□□□ -1.26
VCL-204ENST00000472585 RUNX1Q01196 453 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 PAX5Q02548 391 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 KISS1Q15726 138 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 PAN3Q58A45 887 aaKnown RBP7.19□□□□□ -1.26
VCL-204ENST00000472585 SLC16A12Q6ZSM3 486 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 C5orf24Q7Z6I8 188 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 SPATA24Q86W54 205 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 GID4Q8IVV7 300 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 LINC00311Q8N616 119 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 ZNF439Q8NDP4 499 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 OR6Q1Q8NGQ2 317 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 OR10X1Q8NGY0 326 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 DNAJC9Q8WXX5 260 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
VCL-204ENST00000472585 GHITMQ9H3K2 345 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 RHOFQ9HBH0 211 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 NEK6Q9HC98 313 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 WSB1Q9Y6I7 421 aa7.19□□□□□ -1.26
VCL-204ENST00000472585 FRAS1Q86XX4 4008 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 FAM90A10PA6NDY2 464 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 RRP9O43818 475 aaKnown RBP7.18□□□□□ -1.26
VCL-204ENST00000472585 SOX15O60248 233 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 MOSP00540 346 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 IGHV4-30-4P0DP06 118 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 SLC2A2P11168 524 aaPredicted RBP7.18□□□□□ -1.26
VCL-204ENST00000472585 CALB2P22676 271 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 SOX6P35712 828 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 MTNR1BP49286 362 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 SLURP1P55000 103 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 GNGT1P63211 74 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 GABPB1Q06547 395 aaPredicted RBP7.18□□□□□ -1.26
VCL-204ENST00000472585 ZNF616Q08AN1 781 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 CT45A1Q5HYN5 189 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 ASCL4Q6XD76 172 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 SGPP2Q8IWX5 399 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 SUMF2Q8NBJ7 301 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 OR10A7Q8NGE5 316 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 OR51A2Q8NGJ7 313 aa7.18□□□□□ -1.26
VCL-204ENST00000472585 OR13C3Q8NGS6 347 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms