RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 BCORL1Q5H9F3 1711 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 KIAA1551Q9HCM1 1747 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 A0A096LPI6 279 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 TGIF2-C20orf24A0A0A6YYL0 155 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 RGS16O15492 202 aaPredicted RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 RDH16O75452 317 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 CLDN11O75508 207 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR7C1O76099 320 aaPredicted RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 C1orf105O95561 183 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 LSM8O95777 96 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 HBE1P02100 147 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 CATP04040 527 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 CRYGDP07320 174 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 C8GP07360 202 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ZNF286BP0CG31 522 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 SULT1A3P0DMM9 295 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 SULT1A4P0DMN0 295 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 CD37P11049 281 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 COX7A1P24310 79 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 RPL12P30050 165 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 PYCR1P32322 319 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 RPA3P35244 121 aaPredicted RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 HRH1P35367 487 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 GLP1RP43220 463 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 EVX1P49640 407 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PIGPP57054 158 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 TAS2R43P59537 309 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 NCALDP61601 193 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 RHOBP62745 196 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PPP3R1P63098 170 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 HIST1H3AP68431 136 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 H3F3AP84243 136 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ST3GAL4Q11206 333 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 GUSBP1Q15486 140 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 LRRC26Q2I0M4 334 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 HLA-DRB5Q30154 266 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 TRMT12Q53H54 448 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 CARD16Q5EG05 197 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 STEAP4Q687X5 459 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 DCUN1D2Q6PH85 259 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 SCIMPQ6UWF3 145 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 HIST2H3AQ71DI3 136 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 DOLPP1Q86YN1 238 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 EID2Q8N6I1 236 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 GATD1Q8NB37 220 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ST6GALNAC3Q8NDV1 305 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR52E4Q8NGH9 312 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR4D11Q8NGI4 311 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR10G9Q8NGN4 311 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR1S2Q8NGQ3 325 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 SPPL2BQ8TCT7 592 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 MRPS31Q92665 395 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 DNAJC19Q96DA6 116 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ADTRPQ96IZ2 230 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OR7D2Q96RA2 312 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 GABRG3Q99928 467 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 RNF126Q9BV68 326 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 TAPBPLQ9BX59 468 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 CHST5Q9GZS9 411 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PPDPFQ9H3Y8 114 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PRORYQ9H606 182 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ENY2Q9NPA8 101 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 HRASLS2Q9NWW9 162 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 FAM206AQ9NX38 181 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 MED29Q9NX70 200 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 OPTCQ9UBM4 332 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 LSM7Q9UK45 103 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 ING4Q9UNL4 249 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PSG8Q9UQ74 426 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 TRAPPC4Q9Y296 219 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 ZNF835Q9Y2P0 537 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 PHIPQ8WWQ0 1821 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PTPRJQ12913 1337 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 IGSF9BQ9UPX0 1349 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 PTPRTO14522 1441 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 DENND4BO75064 1496 aaPredicted RBP2.32□□□□□ -2.04
CD46-213ENST00000471987 GRIN2BQ13224 1484 aa2.32□□□□□ -2.04
CD46-213ENST00000471987 KDM5AP29375 1690 aaKnown RBP2.31□□□□□ -2.04
CD46-213ENST00000471987 UTRNP46939 3433 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 BORCS7-ASMTA0A0B4J1R7 106 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 EXOC1LA0A1B0GW35 172 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 C20orf202A1L168 122 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 TRAPPC13A5PLN9 417 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 MAP1LC3B2A6NCE7 125 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 LEUTXA8MZ59 168 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 F6UZH7 168 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 MANBAO00462 879 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
CD46-213ENST00000471987 FABP7O15540 132 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 TCF21O43680 179 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 GADD45GO95257 159 aa2.31□□□□□ -2.04
CD46-213ENST00000471987 OXTP01178 125 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms