RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TSSK6Q9BXA6 273 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 DERL2Q9GZP9 239 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 MAP1LC3AQ9H492 121 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 VSIRQ9H7M9 311 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 BABAM2Q9NXR7 383 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 IL37Q9NZH6 218 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 S4R3C0 116 aa3.98□□□□□ -1.77
SMC5-202ENST00000471372 BAZ2AQ9UIF9 1905 aaKnown RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 PLXNB3Q9ULL4 1909 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 GMNCA6NCL1 334 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 MAGEB4O15481 346 aaPredicted RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 SERPINA6P08185 405 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 GABRA1P14867 456 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 NQO1P15559 274 aaKnown RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 ZNF7P17097 686 aaPredicted RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 GADD45AP24522 165 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 MRPS15P82914 257 aaKnown RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 PPP1R1AQ13522 171 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 MESTQ5EB52 335 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 HES3Q5TGS1 186 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 SLC25A34Q6PIV7 304 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 TCF23Q7RTU1 214 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 NT5DC3Q86UY8 548 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 DOLPP1Q86YN1 238 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 OR9I1Q8NGQ6 314 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 PIGXQ8TBF5 258 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 TNFAIP8L1Q8WVP5 186 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 CYGBQ8WWM9 190 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 PPP1R14BQ96C90 147 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 ZNF717Q9BY31 904 aaPredicted RBP3.97□□□□□ -1.77
SMC5-202ENST00000471372 KIAA1671Q9BY89 1806 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 SCN1AP35498 2009 aa3.97□□□□□ -1.77
SMC5-202ENST00000471372 IGHV3-43A0A0B4J1X8 118 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 COLCA2A8K830 154 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 M0QYV0 167 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 POP7O75817 140 aaKnown RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 CXCL3P19876 107 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 CFL1P23528 166 aaKnown RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 RPS12P25398 132 aaKnown RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 MPV17P39210 176 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 CD79BP40259 229 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 HAAOP46952 286 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 IMPG1Q17R60 797 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 SPIN4Q56A73 249 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 C10orf67Q8IYJ2 551 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 ZFP82Q8N141 532 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 RAB8BQ92930 207 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 TESCQ96BS2 214 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 STARD4Q96DR4 205 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 SDHCQ99643 169 aaPredicted RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 HRASLSQ9HDD0 168 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 GLS2Q9UI32 602 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 ZNF230Q9UIE0 474 aaPredicted RBP3.96□□□□□ -1.78
SMC5-202ENST00000471372 SVILO95425 2214 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 ABCC11Q96J66 1382 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 PLA2R1Q13018 1463 aa3.96□□□□□ -1.78
SMC5-202ENST00000471372 K7EM74 188 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 MFNGO00587 321 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 CXCL2P19875 107 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 TGFBR2P37173 567 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 CDKN2CP42773 168 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 LRRN1Q6UXK5 716 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 AMN1Q8IY45 258 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 OR10D3Q8NH80 312 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 OR5K1Q8NHB7 308 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 SPIN2AQ99865 258 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 SPIN2BQ9BPZ2 258 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 RTBDNQ9BSG5 229 aaPredicted RBP3.95□□□□□ -1.78
SMC5-202ENST00000471372 TIPINQ9BVW5 301 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 PARVAQ9NVD7 372 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 ZNF586Q9NXT0 402 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 TMEM216Q9P0N5 145 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 C3orf18Q9UK00 162 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 ALG5Q9Y673 324 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 TUBGCP6Q96RT7 1819 aa3.95□□□□□ -1.78
SMC5-202ENST00000471372 IGLL5B9A064 214 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 F5H5P2 479 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 LYPLA2O95372 231 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 LINC00614P0C842 121 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 CGB3P0DN86 165 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 CGB7P0DN87 165 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 CTSEP14091 401 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 MIPP30301 263 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 EVI2BP34910 448 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 IDH2P48735 452 aaKnown RBP3.94□□□□□ -1.78
SMC5-202ENST00000471372 INPP1P49441 399 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 H2BFSP57053 126 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 KRTAP10-3P60369 221 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 EIF4EBP1Q13541 118 aaPredicted RBP3.94□□□□□ -1.78
SMC5-202ENST00000471372 TRMT12Q53H54 448 aaKnown RBP3.94□□□□□ -1.78
SMC5-202ENST00000471372 CD200R1LQ6Q8B3 271 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 OR4A5Q8NH83 315 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 PAIP2Q9BPZ3 127 aaKnown RBP3.94□□□□□ -1.78
SMC5-202ENST00000471372 TXNIPQ9H3M7 391 aa3.94□□□□□ -1.78
SMC5-202ENST00000471372 GUCA1BQ9UMX6 200 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms