RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SORT1Q99523 831 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 MCHR1Q99705 422 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 PAIP2Q9BPZ3 127 aaKnown RBP1.99□□□□□ -2.09
UBXN4-206ENST00000470687 CHRDL1Q9BU40 450 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 C20orf27Q9GZN8 174 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 NSRP1Q9H0G5 558 aaKnown RBP1.99□□□□□ -2.09
UBXN4-206ENST00000470687 MAGT1Q9H0U3 335 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 TXNIPQ9H3M7 391 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 ANKRD19PQ9H560 264 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 METTL17Q9H7H0 456 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-206ENST00000470687 CCNB1IP1Q9NPC3 277 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 TMEM38BQ9NVV0 291 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 GID8Q9NWU2 228 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 MED29Q9NX70 200 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 TAS2R5Q9NYW4 299 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 NUP50Q9UKX7 468 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 MED31Q9Y3C7 131 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 PPIAL4AQ9Y536 164 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 USH1CQ9Y6N9 552 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 ATRQ13535 2644 aa1.99□□□□□ -2.09
UBXN4-206ENST00000470687 CSMD1Q96PZ7 3565 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 MAP1AP78559 2803 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 IGHV3-16A0A0C4DH30 117 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 KIR2DS1A0A191URI9 304 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 TMEM120BA0PK00 339 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 BTBD17A6NE02 478 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR6C6A6NF89 314 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ACOD1A6NK06 481 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CLDN24A6NM45 220 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 WRBO00258 174 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 XKRYO14609 159 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR10H3O60404 316 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 GMDSO60547 372 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 RP2O75695 350 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ATP5LO75964 103 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 DIRAS1O95057 198 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR5F1O95221 314 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CA1P00915 261 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 IGHMP01871 453 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 HLA-HP01893 362 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 BGLAPP02818 100 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 PGA4P0DJD7 388 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 PGA3P0DJD8 388 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 GATA1P15976 413 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 KITLGP21583 273 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 BGNP21810 368 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 GALP22466 123 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 COL8A2P25067 703 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CRABP1P29762 137 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CALCRP30988 508 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 TAGLN2P37802 199 aaKnown RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 IFNGR2P38484 337 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 DDOSTP39656 456 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 MDH2P40926 338 aaKnown RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 RPL29P47914 159 aaKnown RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ALDH3B2P48448 385 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ATP1B3P54709 279 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 BIDP55957 195 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 SEC61GP60059 68 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 VSNL1P62760 191 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 SELENOWP63302 87 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CCL8P80075 99 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 GLO1Q04760 184 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 BNIP2Q12982 314 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 C17orf58Q2M2W7 97 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 TTMPQ5BVD1 217 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 NHLRC3Q5JS37 347 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 SPANXN2Q5MJ10 180 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 C9orf135Q5VTT2 229 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 RPL13AP3Q6NVV1 102 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 C16orf87Q6PH81 154 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 FBXW12Q6X9E4 464 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ZNF600Q6ZNG1 722 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CYP4Z1Q86W10 505 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 VRK2Q86Y07 508 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 SKA3Q8IX90 412 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 FTMTQ8N4E7 242 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 LINC00471Q8N535 108 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ZNF283Q8N7M2 679 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR2T33Q8NG76 320 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR4C5Q8NGB2 326 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR1L4Q8NGR5 311 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 OR4Q3Q8NH05 313 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CLDND2Q8NHS1 167 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 KCNG3Q8TAE7 436 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 KLF14Q8TD94 323 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CCL17Q92583 94 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 APOBEC3DQ96AK3 386 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 SGTBQ96EQ0 304 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 TEX37Q96LM6 180 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ARHGDIGQ99819 225 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 HOPXQ9BPY8 73 aaPredicted RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 ECSITQ9BQ95 431 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 CDCA4Q9BXL8 241 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 MRPL37Q9BZE1 423 aaKnown RBP1.98□□□□□ -2.09
UBXN4-206ENST00000470687 GPR61Q9BZJ8 451 aa1.98□□□□□ -2.09
UBXN4-206ENST00000470687 PLA2G12AQ9BZM1 189 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms