RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TMEM225BP0DP42 221 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 CALCBP10092 127 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 HTR1FP30939 366 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 MTNR1BP49286 362 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 GNG10P50151 68 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 CRISP1P54107 249 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 PAX5Q02548 391 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 ATXN7L3Q14CW9 347 aaPredicted RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 PAN3Q58A45 887 aaKnown RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 TMEM236Q5W0B7 351 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 KCTD20Q7Z5Y7 419 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 RDH10Q8IZV5 341 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 NRBF2Q96F24 287 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 COQ2Q96H96 371 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 KCTD7Q96MP8 289 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 MYCBPQ99417 103 aaPredicted RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 S1PR3Q99500 378 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 ELOVL1Q9BW60 279 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 EDA2RQ9HAV5 297 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 ADGRL4Q9HBW9 690 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 GAR1Q9NY12 217 aaKnown RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 WARS2Q9UGM6 360 aaKnown RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 ENOPH1Q9UHY7 261 aa6.87□□□□□ -1.31
XRN1-208ENST00000470537 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
XRN1-208ENST00000470537 H0YJX3 145 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 I3L521 148 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 MAGEB4O15481 346 aaPredicted RBP6.86□□□□□ -1.31
XRN1-208ENST00000470537 SLC25A17O43808 307 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 DCTN3O75935 186 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 IGHV3-7P01780 117 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 CSTBP04080 98 aaKnown RBP6.86□□□□□ -1.31
XRN1-208ENST00000470537 ISG15P05161 165 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 SPNP16150 400 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 CD40LGP29965 261 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 CFHR3Q02985 330 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 PTGES3Q15185 160 aaKnown RBP6.86□□□□□ -1.31
XRN1-208ENST00000470537 Q3ZCU0 254 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 Q6P435 159 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 FAHD1Q6P587 224 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 ADAMTSL5Q6ZMM2 481 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 Q8N6K4 173 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 ZNF491Q8N8L2 437 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 MYOZ3Q8TDC0 251 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 DCUN1D4Q92564 292 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 FGGYQ96C11 551 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 FLYWCH2Q96CP2 140 aaKnown RBP6.86□□□□□ -1.31
XRN1-208ENST00000470537 ASB9Q96DX5 294 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 ZNF107Q9UII5 783 aaPredicted RBP6.86□□□□□ -1.31
XRN1-208ENST00000470537 KIF25Q9UIL4 384 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 RYR2Q92736 4967 aa6.86□□□□□ -1.31
XRN1-208ENST00000470537 IGKV1-9A0A0C4DH69 117 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 LOC107986453A0A1B0GWG9 222 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 B2RBV5 119 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 LINC01619G3V211 115 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 H3BSH0 61 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 MAGEB3O15480 346 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 HSPA12AO43301 675 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 PRKYO43930 277 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 SNX3O60493 162 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 IGHV4-30-4P0DP06 118 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 PI3P19957 117 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 MYF6P23409 242 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 RAB9AP51151 201 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 PITPNAQ00169 270 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 TMED1Q13445 227 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 LTC4SQ16873 150 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 TMEM30BQ3MIR4 351 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 AADACL4Q5VUY2 407 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 STEAP3Q658P3 488 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 ACSM6Q6P461 480 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 LINC00311Q8N616 119 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 TCEANCQ8N8B7 351 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 OR5D14Q8NGL3 314 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 OR13A1Q8NGR1 328 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 RFESDQ8TAC1 157 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 CNIH3Q8TBE1 160 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 TMEM163Q8TC26 289 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 MRGPRDQ8TDS7 321 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 RTN4IP1Q8WWV3 396 aaPredicted RBP6.85□□□□□ -1.31
XRN1-208ENST00000470537 LEAP2Q969E1 77 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 RFKQ969G6 155 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 ADAT3Q96EY9 351 aaPredicted RBP6.85□□□□□ -1.31
XRN1-208ENST00000470537 PPIL3Q9H2H8 161 aaKnown RBP6.85□□□□□ -1.31
XRN1-208ENST00000470537 MED4Q9NPJ6 270 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 PLSCR3Q9NRY6 295 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
XRN1-208ENST00000470537 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
XRN1-208ENST00000470537 IGHV3-72A0A0B4J1Y9 119 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 IGKV1-12A0A0C4DH73 117 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 A0A1W2PQL4 384 aaPredicted RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 AQP12BA6NM10 295 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 HSPB6O14558 160 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 IGKV1D-12P01611 117 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 PRKACGP22612 351 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 PPIFP30405 207 aaKnown RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 REG1BP48304 166 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms