RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GLB1LQ6UWU2 654 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 MOB1BQ7L9L4 216 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PPP1R27Q86WC6 154 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SAXO1Q8IYX7 474 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 RNF175Q8N4F7 328 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SPEM1Q8N4L4 309 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM86BQ8N661 226 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PTGR2Q8N8N7 351 aaPredicted RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 VN1R2Q8NFZ6 395 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 OR2T33Q8NG76 320 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 CNIH3Q8TBE1 160 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 LRRC15Q8TF66 581 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 THEM6Q8WUY1 208 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 DNAJC19Q96DA6 116 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 MS4A6EQ96DS6 147 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF488Q96MN9 340 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 DERL3Q96Q80 235 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SDF2Q99470 211 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF471Q9BX82 626 aaPredicted RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 VN1R3Q9BXE9 311 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SLC17A9Q9BYT1 436 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SIX2Q9NPC8 291 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ACP6Q9NPH0 428 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 PRTFDC1Q9NRG1 225 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 MRPL17Q9NRX2 175 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 LIN7CQ9NUP9 197 aaKnown RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TAS2R5Q9NYW4 299 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 SLC25A37Q9NYZ2 338 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 LHX3Q9UBR4 397 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 TP53TG1Q9Y2A0 90 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF443Q9Y2A4 671 aaPredicted RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 POLDIP2Q9Y2S7 368 aa4.38□□□□□ -1.71
COL3A1-205ENST00000470167 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
COL3A1-205ENST00000470167 MRC1P22897 1456 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 BAHCC1Q9P281 2608 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 FXYD6-FXYD2A0A087WZ82 144 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 A0A0G2JNJ9 132 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF816-ZNF321PA0A0X1KG74 233 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ODAMA1E959 279 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 NAP1L6A6NFF2 107 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CD300LBA8K4G0 201 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF705FA8MVS1 300 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 PIRO00625 290 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ARPC2O15144 300 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CREBL2O60519 120 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CLDN11O75508 207 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CD8AP01732 235 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF705DP0CH99 300 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF705BP0CI00 300 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 FCARP24071 287 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CDK2P24941 298 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 BLVRBP30043 206 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 G6PCP35575 357 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 GDF5P43026 501 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 GUCA1AP43080 201 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 AVPR1BP47901 424 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 HSPE1P61604 102 aaKnown RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CD69Q07108 199 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 MELKQ14680 651 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 GINS1Q14691 196 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TAL2Q16559 108 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 DUSP5Q16690 384 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 DUX4L9Q6RFH8 374 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 SBSNQ6UWP8 590 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZN92 141 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZSR3 168 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZTK2 550 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 FAM19A1Q7Z5A9 133 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM219Q86XT9 240 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TGIF2LYQ8IUE0 185 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF433Q8N7K0 673 aaPredicted RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 LINC00482Q8N8I6 264 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 OR52I1Q8NGK6 324 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 OR1L8Q8NGR8 309 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 MFSD8Q8NHS3 518 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 OR5P3Q8WZ94 311 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 HPDLQ96IR7 371 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 SGK494Q96LW2 274 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 SPIN2AQ99865 258 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 SPIN2BQ9BPZ2 258 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 MRPL45Q9BRJ2 306 aaKnown RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 PYGO2Q9BRQ0 406 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 C19orf24Q9BVV8 132 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 CHIAQ9BZP6 476 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 FXYD6Q9H0Q3 95 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 HES4Q9HCC6 221 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM9BQ9NQ34 198 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 PARP11Q9NR21 331 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 SERTAD4Q9NUC0 356 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM106BQ9NUM4 274 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 KCNIP1Q9NZI2 227 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms