RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LPAR3Q9UBY5 353 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 KIF25Q9UIL4 384 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
TRAF4-208ENST00000469529 DYSFO75923 2080 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 MEIKINA0A087WXM9 373 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 HSPB6O14558 160 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 NDUFB3O43676 98 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 ZNF205O95201 554 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 IGHV4-39P01824 125 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 AMY2AP04746 511 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 IFNA6P05013 189 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 OR5H8P0DN80 308 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 RBMXP38159 391 aaKnown RBP10.58□□□□□ -0.72
TRAF4-208ENST00000469529 ECI1P42126 302 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 GLIPR1P48060 266 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 HTD2P86397 168 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 ATXN7L3Q14CW9 347 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-208ENST00000469529 TMEM30BQ3MIR4 351 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 LRRC10Q5BKY1 277 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 OR51S1Q8NGJ8 323 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 OR6F1Q8NGZ6 308 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 OR56B4Q8NH76 319 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 SCGB3A2Q96PL1 93 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 KCNIP1Q9NZI2 227 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 SLC25A10Q9UBX3 287 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-208ENST00000469529 ITGB1BP2Q9UKP3 347 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 TRAPPC2LQ9UL33 140 aa10.58□□□□□ -0.72
TRAF4-208ENST00000469529 HRNRQ86YZ3 2850 aaPredicted RBP10.58□□□□□ -0.72
TRAF4-208ENST00000469529 PDZD2O15018 2839 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 hADV38S2A0JD32 116 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 F5H0A9 414 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 M0QYG6 137 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 ADAM20O43506 726 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 NDUFS7O75251 213 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 TUSC2O75896 110 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 PMP2P02689 132 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 TFF1P04155 84 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 UCP3P55916 312 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 ARPC4P59998 168 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 SEC61A1P61619 476 aaKnown RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 LYPD2Q6UXB3 125 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 ZNF782Q6ZMW2 699 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 LRRC75A-AS1Q8N1F1 130 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 FAM216BQ8N7L0 139 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 OR13C8Q8NGS7 320 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 PATZ1Q9HBE1 687 aaKnown RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 BEX4Q9NWD9 120 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 MCUBQ9NWR8 336 aa10.57□□□□□ -0.72
TRAF4-208ENST00000469529 UBE2J1Q9Y385 318 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-208ENST00000469529 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 C12orf77C9JDV5 145 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 C15orf65H3BRN8 121 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 F2RL2O00254 374 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 DVL1O14640 695 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 FCN3O75636 299 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 SCTP09683 121 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 SPNP16150 400 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-208ENST00000469529 PDLIM4P50479 330 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 CCR6P51684 374 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 TSPAN5P62079 268 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 HERPUD1Q15011 391 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 AADACL3Q5VUY0 350 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 IDO2Q6ZQW0 420 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 NLRC3Q7RTR2 1065 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 TMEM185AQ8NFB2 350 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 OR52M1Q8NGK5 317 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 OR13A1Q8NGR1 328 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 C8orf46Q8TAG6 207 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 GALMQ96C23 342 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 MBD6Q96DN6 1003 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 NEIL1Q96FI4 390 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-208ENST00000469529 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 CTSZQ9UBR2 303 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 LINC00312Q9Y6C7 94 aa10.56□□□□□ -0.72
TRAF4-208ENST00000469529 TRGV10A0A0A0MS01 117 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 KBTBD11-OT1A0A1B0GTJ5 212 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 A0A1B0GW55 424 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-208ENST00000469529 VWC2LB2RUY7 222 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 ITGB1BP1O14713 200 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 SPINT2O43291 252 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 SSX4O60224 188 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 LY6HO94772 140 aa10.55□□□□□ -0.72
TRAF4-208ENST00000469529 DUX4L2P0CJ85 424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms