RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OR4C12Q96R67 309 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 APOL4Q9BPW4 351 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 OSBPL10Q9BXB5 764 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 OR51J1Q9H342 316 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 TUBA4BQ9H853 241 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 HEYLQ9NQ87 328 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 DCAF13Q9NV06 445 aaKnown RBP3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF581Q9P0T4 197 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 ACTR3BQ9P1U1 418 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 DNAJB9Q9UBS3 223 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 SELENOKQ9Y6D0 94 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 CEPT1Q9Y6K0 416 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 V9GYS6 101 aa3.99□□□□□ -1.77
PTPN4-209ENST00000469511 IGHV7-81A0A0B4J1V7 117 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 IGHV3-43A0A0B4J1X8 118 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 IGKV1-9A0A0C4DH69 117 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 KBTBD11-OT1A0A1B0GTJ5 212 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF729A6NN14 1252 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 F5H697 171 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 HSPB6O14558 160 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 HSD17B6O14756 317 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 SLC31A2O15432 143 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 RRP9O43818 475 aaKnown RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 EDF1O60869 148 aaKnown RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 NPPAP01160 153 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 MRPL3P09001 348 aaKnown RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CD7P09564 240 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 OR8U9P0C7N5 309 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 IGHV3-43DP0DP04 118 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 ATP6V1B1P15313 513 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 H2AFXP16104 143 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 EDN2P20800 178 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 HTR1FP30939 366 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 SOX6P35712 828 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 PITPNAQ00169 270 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 TNFRSF9Q07011 255 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF816Q0VGE8 651 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 MADCAM1Q13477 382 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF146Q15072 292 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 COQ5Q5HYK3 327 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 KRBOX4Q5JUW0 171 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 SLX4IPQ5VYV7 408 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 MZT2AQ6P582 158 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 TMEM65Q6PI78 240 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CEMP1Q6PRD7 247 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 C5orf24Q7Z6I8 188 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 OR8H3Q8N146 312 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 OR4D6Q8NGJ1 314 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 OR2T10Q8NGZ9 312 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 PLPPR1Q8TBJ4 325 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 RFT1Q96AA3 541 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 EME1Q96AY2 570 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CREB3L1Q96BA8 519 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 MS4A10Q96PG2 267 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 RASL11BQ9BPW5 248 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 GAL3ST2Q9H3Q3 398 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CMC2Q9NRP2 79 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 INTS9Q9NV88 658 aaKnown RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 GID8Q9NWU2 228 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 CALYQ9NYX4 217 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 IDI2-AS1Q9NZ38 188 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 NUFIP1Q9UHK0 495 aaKnown RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF107Q9UII5 783 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-209ENST00000469511 KIF25Q9UIL4 384 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 GTF2A1LQ9UNN4 478 aa3.98□□□□□ -1.77
PTPN4-209ENST00000469511 PKD1P98161 4303 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 TRGV11A0A075B6L2 103 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 TRAV41A0A0B4J266 112 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 TRBV2A0A0J9YWF9 115 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 BBIP1A8MTZ0 92 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 NPIPB11E5RHQ5 1161 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-209ENST00000469511 MPZL2O60487 215 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 RGS11O94810 467 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 MOSP00540 346 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 LGALS1P09382 135 aaKnown RBP3.97□□□□□ -1.77
PTPN4-209ENST00000469511 EGR2P11161 476 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-209ENST00000469511 SLC2A5P22732 501 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 BLVRBP30043 206 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-209ENST00000469511 SSTR5P35346 364 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 GLP1RP43220 463 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 RAB7AP51149 207 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 BLVRAP53004 296 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 DEFA5Q01523 94 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 CDK5R1Q15078 307 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 METTL21CQ5VZV1 264 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 Q6ZSR3 168 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 ANKRD13BQ86YJ7 626 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 CPOQ8IVL8 374 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 IZUMO1Q8IYV9 350 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 ELMOD2Q8IZ81 293 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 AQP11Q8NBQ7 271 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 MINDY2Q8NBR6 621 aa3.97□□□□□ -1.77
PTPN4-209ENST00000469511 OR5D18Q8NGL1 313 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms