RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 TMEM56-RWDD3S4R434 201 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 CACNA1DQ01668 2161 aa10.34□□□□□ -0.75
VARS2-205ENST00000469358 GPR179Q6PRD1 2367 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 LOC102723996A0A087X1L8 192 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 CELA3AP09093 270 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 PSG2P11465 335 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 MMP9P14780 707 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 ZNF16P17020 682 aaPredicted RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 EXT1Q16394 746 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 ZNF880Q6PDB4 577 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 AGBL5Q8NDL9 886 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 SH2D2AQ9NP31 389 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 METTL15P1P0C7V9 234 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 CXCL12P48061 93 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 RAB1AP62820 205 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 HOXA4Q00056 320 aaPredicted RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 GPR146Q96CH1 333 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 PFDN5Q99471 154 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 PCED1AQ9H1Q7 454 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 RPRMQ9NS64 109 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 HSPA12AO43301 675 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 MMP7P09237 267 aaPredicted RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 MLF1P58340 268 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 ARF1P84077 181 aaKnown RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 ID3Q02535 119 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 SPINK14Q6IE38 97 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 SPEM1Q8N4L4 309 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 ZNF610Q8N9Z0 462 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 INTS12Q96CB8 462 aaKnown RBP10.33□□□□□ -0.76
VARS2-205ENST00000469358 TCEAL7Q9BRU2 100 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 NIPSNAP3BQ9BS92 247 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 OR1A1Q9P1Q5 309 aa10.33□□□□□ -0.76
VARS2-205ENST00000469358 LRRC3CA6NJW4 275 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 GDF1P27539 372 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 BEND4Q6ZU67 534 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 ERRFI1Q9UJM3 462 aaPredicted RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 NCOR1O75376 2440 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 P04436 131 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 CD55P08174 381 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 VDAC1P21796 283 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 CDX1P47902 265 aaPredicted RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 KDF1Q8NAX2 398 aaPredicted RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 ABHD5Q8WTS1 349 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 FRZBQ92765 325 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 HES7Q9BYE0 225 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 PRO1933Q9H354 126 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 PPP1R3CQ9UQK1 317 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 MRPS17Q9Y2R5 130 aaKnown RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 CNOT4O95628 575 aaKnown RBP10.32□□□□□ -0.76
VARS2-205ENST00000469358 NAPSAO96009 420 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 ZNF726P1Q15940 193 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 C3AR1Q16581 482 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 SPATA46Q5T0L3 261 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 LYSMD4Q5XG99 296 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 IL36GQ9NZH8 169 aa10.32□□□□□ -0.76
VARS2-205ENST00000469358 GTF3C1Q12789 2109 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 KNTC1P50748 2209 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 SLC34A2O95436 690 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 KRTAP27-1Q3LI81 207 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 WDR5BQ86VZ2 330 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 OR2V1Q8NHB1 315 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 SF3B5Q9BWJ5 86 aaKnown RBP10.31□□□□□ -0.76
VARS2-205ENST00000469358 UBE2ZQ9H832 354 aaPredicted RBP10.31□□□□□ -0.76
VARS2-205ENST00000469358 GAR1Q9NY12 217 aaKnown RBP10.31□□□□□ -0.76
VARS2-205ENST00000469358 KIAA1549Q9HCM3 1950 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 DOCK11Q5JSL3 2073 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 RHBDL1O75783 438 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 FABP4P15090 132 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 UCP1P25874 307 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 S100A2P29034 98 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 KHDC3LQ587J8 217 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 TRIM61Q5EBN2 209 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 OR2T2Q6IF00 324 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 PCSK4Q6UW60 755 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 CACNG5Q9UF02 275 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 PRR14LQ5THK1 2151 aa10.31□□□□□ -0.76
VARS2-205ENST00000469358 C9J4A7 227 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 FGF5P12034 268 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 SELEP16581 610 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 CD200P41217 278 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 COL19A1Q14993 1142 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 ZNF506Q5JVG8 444 aa10.3□□□□□ -0.76
VARS2-205ENST00000469358 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
VARS2-205ENST00000469358 OR2Y1Q8NGV0 311 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms