RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 OR4A8P0C604 315 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 IL11P20809 199 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 VDAC1P21796 283 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 KIR3DL2P43630 455 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 DOLPP1Q86YN1 238 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 TGIF2LYQ8IUE0 185 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 TGIF2LXQ8IUE1 241 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 BVESQ8NE79 360 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 PHYHIPLQ96FC7 376 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 MARS2Q96GW9 593 aaKnown RBP13.12□□□□□ -0.31
LIMS2-213ENST00000469300 HSD17B10Q99714 261 aaKnown RBP13.12□□□□□ -0.31
LIMS2-213ENST00000469300 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-213ENST00000469300 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 H3BP45 60 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 F2RP25116 425 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 MTCH1Q9NZJ7 389 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 CACNG5Q9UF02 275 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
LIMS2-213ENST00000469300 CST7O76096 145 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 ZNF25P17030 456 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-213ENST00000469300 TPPP2P59282 170 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 CD81P60033 236 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 RNF122Q9H9V4 155 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 ELOVL5Q9NYP7 299 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 NPIPB9F8W1W9 429 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 PPYP01298 95 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 NTF3P20783 257 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 CD200P41217 278 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM45BQ96B21 275 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 CXorf58Q96LI9 332 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 MRPS18CQ9Y3D5 142 aaKnown RBP13.11□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM229AB2RXF0 380 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 F2RL2O00254 374 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 SOX15O60248 233 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 SLC6A1P30531 599 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 ZFP36L1Q07352 338 aaKnown RBP13.11□□□□□ -0.31
LIMS2-213ENST00000469300 C10orf128Q5T292 105 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 GUCD1Q96NT3 240 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 PRDM14Q9GZV8 571 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-213ENST00000469300 IGKV1D-42A0A075B6H8 117 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 OR5AC1P0C628 307 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 RBM11P57052 281 aaKnown RBP13.11□□□□□ -0.31
LIMS2-213ENST00000469300 ETV3LQ6ZN32 361 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 GVQW1Q8N7I0 195 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 TIMM9Q9Y5J7 89 aa13.11□□□□□ -0.31
LIMS2-213ENST00000469300 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM267Q0VDI3 215 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-213ENST00000469300 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM123Q8N131 208 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 OR4F5Q8NH21 305 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 OR4F4Q96R69 305 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TIMP4Q99727 224 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 PKIBQ9C010 78 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 PRSS50Q9UI38 385 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 OR2W1Q9Y3N9 320 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
LIMS2-213ENST00000469300 SLC38A11Q08AI6 406 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 ELOA3CA0A087WX78 387 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 PRDX2P32119 198 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 HIST1H3AP68431 136 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 ZNF90Q03938 601 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM147Q9BVK8 224 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 ZNF703Q9H7S9 590 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-213ENST00000469300 OPRK1P41145 380 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 FGF12P61328 243 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 RPL31P62899 125 aaKnown RBP13.1□□□□□ -0.31
LIMS2-213ENST00000469300 Q56UQ5 140 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 PRSS54Q6PEW0 395 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 OR2C3Q8N628 320 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 NPAS1Q99742 590 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 SMIM7Q9BQ49 75 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
LIMS2-213ENST00000469300 DLL1O00548 723 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 DVL1P1P54792 670 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-213ENST00000469300 TMEM183BQ1AE95 376 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 LIAT1Q6ZQX7 453 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 SCN2AQ99250 2005 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
LIMS2-213ENST00000469300 HMSDA8MTL9 139 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 PCP4P48539 62 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 ACSM6Q6P461 480 aa13.09□□□□□ -0.31
LIMS2-213ENST00000469300 ZNF66Q6ZN08 573 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms