RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 OR10R2Q8NGX6 335 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 OR4K15Q8NH41 348 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 MRPL30Q8TCC3 161 aaKnown RBP9.75□□□□□ -0.85
VPS13D-204ENST00000469054 LGALS14Q8TCE9 139 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF418Q8TF45 676 aaPredicted RBP9.75□□□□□ -0.85
VPS13D-204ENST00000469054 SLC25A46Q96AG3 418 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ARHGAP5-AS1Q96IT6 56 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF48Q96MX3 618 aaPredicted RBP9.75□□□□□ -0.85
VPS13D-204ENST00000469054 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 PECRQ9BY49 303 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 LINC00574Q9H8X3 128 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 CALYQ9NYX4 217 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ABRACLQ9P1F3 81 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 TRAPPC2LQ9UL33 140 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ETV7Q9Y603 341 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 ORC5O43913 435 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 SSTR5P35346 364 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 GDNFP39905 211 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 C6orf183Q5T699 404 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 RTN4RL2Q86UN3 420 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 OR11H6Q8NGC7 330 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 OR5H6Q8NGV6 325 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 RFESDQ8TAC1 157 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 KIRREL1Q96J84 757 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 ATG5Q9H1Y0 275 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 RIMS4Q9H426 269 aaPredicted RBP9.74□□□□□ -0.85
VPS13D-204ENST00000469054 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
VPS13D-204ENST00000469054 IDI2-AS1Q9NZ38 188 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 AK3Q9UIJ7 227 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 SPATA2Q9UM82 520 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
VPS13D-204ENST00000469054 A0A087X0M5 115 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 A0A0A6YYJ9 748 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 IGHV2-26A0A0B4J1V2 119 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 A0A0U1RQK1 487 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 A0A1B0GX30 115 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 MEIOCA2RUB1 952 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 TCF21O43680 179 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 NAPSAO96009 420 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 RCC1P18754 421 aaPredicted RBP9.73□□□□□ -0.85
VPS13D-204ENST00000469054 SAA4P35542 130 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 RORCP51449 518 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 TMBIM6P55061 237 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 MIDNQ504T8 468 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF626Q68DY1 528 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 BAIAP2L2Q6UXY1 529 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 RBMS3Q6XE24 437 aaKnown RBP9.73□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF554Q86TJ5 538 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 ABHD12Q8N2K0 398 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 SIGLECL1Q8N7X8 197 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 NDNFQ8TB73 568 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 RAB2BQ8WUD1 216 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 BCL7BQ9BQE9 202 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 CLEC7AQ9BXN2 247 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 PRDM13Q9H4Q3 707 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 RHBDL2Q9NX52 303 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
VPS13D-204ENST00000469054 TRBV6-6A0A0A6YYG2 114 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 ODF3BA8MYP8 253 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 C12orf77C9JDV5 145 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 MFNGO00587 321 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 SPINT2O43291 252 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 SCGNO76038 276 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 ARG1P05089 322 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 HIST1H1DP16402 221 aaKnown RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 GNB3P16520 340 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 NFYBP25208 207 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 CD34P28906 385 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 LGALS4P56470 323 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 HILS1P60008 231 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 DYNC1I2Q13409 638 aaKnown RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 ARL6IP1Q15041 203 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 LTC4SQ16873 150 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 OR52M1Q8NGK5 317 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 SLC25A38Q96DW6 304 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 CMSS1Q9BQ75 279 aaKnown RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 ZMAT3Q9HA38 289 aaKnown RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 TAF9BQ9HBM6 251 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 CHMP1AQ9HD42 196 aaPredicted RBP9.72□□□□□ -0.85
VPS13D-204ENST00000469054 RAB9BQ9NP90 201 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 KCNIP1Q9NZI2 227 aa9.72□□□□□ -0.85
VPS13D-204ENST00000469054 A0A075B6Q4 140 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 FAM172BPA6NC97 362 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 F2RL2O00254 374 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 FBP1P09467 338 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 CD3GP09693 182 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms