RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 NHLH1Q02575 133 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 FOXC1Q12948 553 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 RAB32Q13637 225 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 SMCO1Q147U7 214 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 CR1LQ2VPA4 569 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 SMIM21Q3B7S5 101 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 LRRC37A5PQ49AS3 106 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 EIF5AL1Q6IS14 154 aaKnown RBP6.43□□□□□ -1.38
COL6A3-208ENST00000468792 TRAT1Q6PIZ9 186 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 WDR82Q6UXN9 313 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 ACP7Q6ZNF0 438 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 C20orf204Q6ZNR8 217 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 Q6ZR03 302 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 DOLPP1Q86YN1 238 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 PDZD9Q8IXQ8 264 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 OR5T2Q8NGG2 359 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 OR5D13Q8NGL4 314 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 NEK7Q8TDX7 302 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 DCUN1D4Q92564 292 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 RDH5Q92781 318 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 S100PBPQ96BU1 408 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 CCDC120Q96HB5 630 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF488Q96MN9 340 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 CYTL1Q9NRR1 136 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 TINAGQ9UJW2 476 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 NSG2Q9Y328 171 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 ACACAQ13085 2346 aa6.43□□□□□ -1.38
COL6A3-208ENST00000468792 OOEPA6NGQ2 149 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 MPTX1A8MV57 137 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 NUDT19A8MXV4 375 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 SRRM5B3KS81 715 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 F5H0A9 414 aaPredicted RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 H0YL77 283 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 BET1O15155 118 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 SHOXO15266 292 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ZNHIT1O43257 154 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 FGF16O43320 207 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 LHBP01229 141 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 GRPP07492 148 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ADH4P08319 380 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 VDAC1P21796 283 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 PTAFRP25105 342 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 F2RP25116 425 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 P2RY1P47900 373 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 FABP6P51161 128 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 KLF3P57682 345 aaPredicted RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 TMPRSS3P57727 454 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 FXYD4P59646 89 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 SELENOVP59797 346 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 RBPJQ06330 500 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 SNTB1Q13884 538 aaKnown RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ESPL1Q14674 2120 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 C6orf183Q5T699 404 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ZNF818PQ6ZRF7 136 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 TBC1D26Q86UD7 250 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 BAP18Q8IXM2 172 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 TCTEX1D1Q8N7M0 179 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 OR4D5Q8NGN0 318 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 OR1S1Q8NH92 325 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 TMEM171Q8WVE6 324 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 MRPL24Q96A35 216 aaKnown RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 RRNAD1Q96FB5 475 aaKnown RBP6.42□□□□□ -1.38
COL6A3-208ENST00000468792 LURAP1Q96LR2 239 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 REG4Q9BYZ8 158 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 SLC5A7Q9GZV3 580 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 OR5AC2Q9NZP5 309 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ZDHHC8Q9ULC8 765 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 TP53TG5Q9Y2B4 290 aa6.42□□□□□ -1.38
COL6A3-208ENST00000468792 ATMQ13315 3056 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 DCHS1Q96JQ0 3298 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 hCG_1807616A0A1W2PRN6 198 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 MFSD2BA6NFX1 497 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 A8MXK9 166 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 C16orf97H3BN30 126 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 ST8SIA3O43173 380 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 PHF1O43189 567 aaPredicted RBP6.41□□□□□ -1.38
COL6A3-208ENST00000468792 PGLYRP1O75594 196 aaPredicted RBP6.41□□□□□ -1.38
COL6A3-208ENST00000468792 JTBO76095 146 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 SPDEFO95238 335 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 HKR1P10072 659 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 RCC1P18754 421 aaPredicted RBP6.41□□□□□ -1.38
COL6A3-208ENST00000468792 LUMP51884 338 aaPredicted RBP6.41□□□□□ -1.38
COL6A3-208ENST00000468792 P2RX3P56373 397 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 HTD2P86397 168 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 TESK1Q15569 626 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 PHLDA2Q53GA4 152 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 NMSQ5H8A3 153 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 ALKAL2Q6UX46 152 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 LYZL2Q7Z4W2 148 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 COMMD7Q86VX2 200 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 SELENOHQ8IZQ5 122 aaKnown RBP6.41□□□□□ -1.38
COL6A3-208ENST00000468792 RPRMLQ8N4K4 120 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 UBAC2Q8NBM4 344 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 OR10V1Q8NGI7 309 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 PPP1R35Q8TAP8 253 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 PLPPR1Q8TBJ4 325 aa6.41□□□□□ -1.38
COL6A3-208ENST00000468792 Q8TCH9 128 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms