RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SEH1LQ96EE3 360 aa11.96□□□□□ -0.49
COL27A1-203ENST00000468565 CCL13Q99616 98 aa11.96□□□□□ -0.49
COL27A1-203ENST00000468565 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.49
COL27A1-203ENST00000468565 DNAJB11Q9UBS4 358 aa11.96□□□□□ -0.49
COL27A1-203ENST00000468565 TRAV40A0A0B4J280 105 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 MEIS3P1A6NDR6 274 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 NRASP01111 189 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 BPIFB3P59826 476 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 FGF12P61328 243 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF529Q6P280 563 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 ZDHHC22Q8N966 263 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 MS4A7Q9GZW8 240 aaPredicted RBP11.96□□□□□ -0.5
COL27A1-203ENST00000468565 WDR13Q9H1Z4 485 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 ESM1Q9NQ30 184 aa11.96□□□□□ -0.5
COL27A1-203ENST00000468565 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.5
COL27A1-203ENST00000468565 RAB3DO95716 219 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 CD3DP04234 171 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 RLN1P04808 185 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 AMY2BP19961 511 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 BCL6BQ8N143 479 aaPredicted RBP11.95□□□□□ -0.5
COL27A1-203ENST00000468565 SIGLECL1Q8N7X8 197 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 OR51S1Q8NGJ8 323 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 OR13C9Q8NGT0 318 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 OR2T35Q8NGX2 323 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 ST8SIA4Q92187 359 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 AQP3Q92482 292 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
COL27A1-203ENST00000468565 ANK2Q01484 3957 aa11.95□□□□□ -0.5
COL27A1-203ENST00000468565 A0A1B0GW55 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 NKX6-3A6NJ46 265 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 NDUFB3O43676 98 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 TSC22D2O75157 780 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 RHBDL1O75783 438 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 CYB5AP00167 134 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 GIPP09681 153 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 MMP9P14780 707 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 GLRA1P23415 457 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 AP2S1P53680 142 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 OR10K2Q6IF99 312 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 FAM216BQ8N7L0 139 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 OR11H4Q8NGC9 324 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF48Q96MX3 618 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 FBLN5Q9UBX5 448 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 RPUSD1Q9UJJ7 312 aaKnown RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 SHOXO15266 292 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 SNAPC5O75971 98 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 TOX4O94842 621 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 GMFBP60983 142 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 RAP2BP61225 183 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 LRRC10Q5BKY1 277 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 HAGHLQ6PII5 290 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF573Q86YE8 665 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 OR5T2Q8NGG2 359 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 GPR173Q9NS66 373 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 RASL12Q9NYN1 266 aa11.94□□□□□ -0.5
COL27A1-203ENST00000468565 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 PQLC2LA1A4F0 135 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 OR2AT4A6NND4 320 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
COL27A1-203ENST00000468565 MELTFP08582 738 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 VSIG10L2P0DP72 767 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 VAMP1P23763 118 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 ZNF93P35789 620 aaPredicted RBP11.93□□□□□ -0.5
COL27A1-203ENST00000468565 HTR2BP41595 481 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 IL13RA1P78552 427 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 OR2W3Q7Z3T1 314 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 GAFA1Q96PS6 74 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
COL27A1-203ENST00000468565 PCGF1Q9BSM1 259 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 CHIAQ9BZP6 476 aa11.93□□□□□ -0.5
COL27A1-203ENST00000468565 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 J3QT63 122 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 SIGLEC5O15389 551 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 C4BPBP20851 252 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
COL27A1-203ENST00000468565 QRFPP83859 136 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 IKZF1Q13422 519 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 MEF2DQ14814 521 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 PDCD1Q15116 288 aa11.92□□□□□ -0.5
COL27A1-203ENST00000468565 FAM189A2Q15884 450 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms