RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 AKAP9Q99996 3911 aa12.51□□□□□ -0.41
SNIP1-202ENST00000468040 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNIP1-202ENST00000468040 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 MED13LQ71F56 2210 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
SNIP1-202ENST00000468040 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 ORC5O43913 435 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 TOX4O94842 621 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 FCGR3AP08637 254 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 DTYMKP23919 212 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 TNFSF8P32971 234 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 DLX6P56179 175 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 CLEC9AQ6UXN8 241 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 TEX29Q8N6K0 151 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 CALYQ9NYX4 217 aa12.5□□□□□ -0.41
SNIP1-202ENST00000468040 ARHGAP32A7KAX9 2087 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
SNIP1-202ENST00000468040 SPINT2O43291 252 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 LY6G6DO95868 133 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 CGB3P0DN86 165 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 CGB7P0DN87 165 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 MMP9P14780 707 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 RCC1P18754 421 aaPredicted RBP12.49□□□□□ -0.41
SNIP1-202ENST00000468040 PRSS3P35030 304 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 SSTR5P35346 364 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 SRSF7Q16629 238 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNIP1-202ENST00000468040 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 HEPN1Q6WQI6 88 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 OR6Q1Q8NGQ2 317 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 NUDCD2Q8WVJ2 157 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 SMR3AQ99954 134 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 PCGF1Q9BSM1 259 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 LINC00574Q9H8X3 128 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
SNIP1-202ENST00000468040 TAF9BQ9HBM6 251 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 Q9N2K0 584 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 YAE1D1Q9NRH1 226 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
SNIP1-202ENST00000468040 ABCA1O95477 2261 aa12.49□□□□□ -0.41
SNIP1-202ENST00000468040 FABP12A6NFH5 140 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 C12orf77C9JDV5 145 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 NPIPB11E5RHQ5 1161 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 PRTN3P24158 256 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 KIR2DS4P43632 304 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 CBX5P45973 191 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 HMGN3Q15651 99 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 SPANXN2Q5MJ10 180 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 PYHIN1Q6K0P9 492 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 VMO1Q7Z5L0 202 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 C11orf42Q8N5U0 333 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 Q8N7P7 452 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 UPRTQ96BW1 309 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 SCPEP1Q9HB40 452 aa12.48□□□□□ -0.41
SNIP1-202ENST00000468040 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 SULT1C2O00338 296 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 SSX5O60225 188 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 LPLP06858 475 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 IGHV1-8P0DP01 117 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 PTHLHP12272 177 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 FPR2P25090 351 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 MRPS10P82664 201 aaKnown RBP12.47□□□□□ -0.41
SNIP1-202ENST00000468040 IL18Q14116 193 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 Q6ZPA2 131 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 Q6ZS49 121 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 PRR18Q8N4B5 295 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 TBX15Q96SF7 602 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 OCSTAMPQ9BR26 566 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF286AQ9HBT8 521 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 IDI2-AS1Q9NZ38 188 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 SESN1Q9Y6P5 492 aa12.47□□□□□ -0.41
SNIP1-202ENST00000468040 TRDCB7Z8K6 153 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 F2RL2O00254 374 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 HBZP02008 142 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 HNF1AP20823 631 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 OMGP23515 440 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 ETV6P41212 452 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 MADCAM1Q13477 382 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms