RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SRD5A3Q9H8P0 318 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 SPINT1O43278 529 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 HYAL3O43820 417 aaPredicted RBP7.64□□□□□ -1.19
HPS4-209ENST00000466781 PF4P02776 101 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 C19orf48Q6RUI8 117 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 ANAPC16Q96DE5 110 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 TTTY12Q9BZ98 90 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 TOLLIPQ9H0E2 274 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 OR51B2Q9Y5P1 312 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 OTOFQ9HC10 1997 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 A0A1W2PS18 150 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 PRR33A8MZF0 331 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 PRSS12P56730 875 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 ERVS71-1P61550 626 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 PMS2P11Q13670 270 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 DCAF10Q5QP82 559 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 OR1L8Q8NGR8 309 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 C16orf92Q96LL3 132 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 DUSP21Q9H596 190 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 MYO18AQ92614 2054 aaKnown RBP7.64□□□□□ -1.19
HPS4-209ENST00000466781 CTSDP07339 412 aaPredicted RBP7.64□□□□□ -1.19
HPS4-209ENST00000466781 CCL3P10147 92 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 ADIPOQQ15848 244 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 CSRP2Q16527 193 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 ABHD3Q8WU67 409 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 ZNF714Q96N38 554 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 MOGAT1Q96PD6 335 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 CCL19Q99731 98 aa7.64□□□□□ -1.19
HPS4-209ENST00000466781 B4E171 279 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 J3QT63 122 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 WNT9BO14905 357 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 PF4V1P10720 104 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 CTLA4P16410 223 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TSPAN7P41732 249 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 NUBP1P53384 320 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TAS2R60P59551 318 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 RELBQ01201 579 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 LAMTOR1Q6IAA8 161 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 ZNF770Q6IQ21 691 aaPredicted RBP7.63□□□□□ -1.19
HPS4-209ENST00000466781 MDP1Q86V88 176 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 LRP11Q86VZ4 500 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 A0A0G2JMZ2 1700 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 LRRC37A2A6NM11 1700 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 IGHV3-21A0A0B4J1V1 117 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 KLF7O75840 302 aaPredicted RBP7.63□□□□□ -1.19
HPS4-209ENST00000466781 CSF2RBP32927 897 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 P2RY1P47900 373 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 LGALSLQ3ZCW2 172 aaPredicted RBP7.63□□□□□ -1.19
HPS4-209ENST00000466781 SH2D5Q6ZV89 423 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SHISA5Q8N114 240 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 OR1N2Q8NGR9 330 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 MS4A10Q96PG2 267 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SLC35B3Q9H1N7 401 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 Q9N2K0 584 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 GEMIN2O14893 280 aaKnown RBP7.63□□□□□ -1.19
HPS4-209ENST00000466781 SYNGR1O43759 233 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SYNGR2O43760 224 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SMPD2O60906 423 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 GCGP01275 180 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 FBXW9Q5XUX1 488 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 PRNTQ86SH4 94 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SSMEM1Q8WWF3 244 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 DDA1Q9BW61 102 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SLC52A3Q9NQ40 469 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 C11orf94C9JXX5 98 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 SRSF10O75494 262 aaKnown RBP7.63□□□□□ -1.19
HPS4-209ENST00000466781 PRR35P0CG20 571 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TCL1AP56279 114 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 CD226Q15762 336 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 GABRA6Q16445 453 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TEX30Q5JUR7 227 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 C1orf174Q8IYL3 243 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 RAX2Q96IS3 184 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 RNF122Q9H9V4 155 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TMEM140Q9NV12 185 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TRAV34A0A0B4J273 112 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 HPXP02790 462 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 GALP22466 123 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 REG1BP48304 166 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 DHRS2Q13268 280 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 ELOBQ15370 118 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TWIST1Q15672 202 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 PRSS54Q6PEW0 395 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 ZNF738Q8NE65 137 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 STXBP6Q8NFX7 210 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 TIMP4Q99727 224 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 WDR54Q9H977 334 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 MTFP1Q9UDX5 166 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 HILPDAQ9Y5L2 63 aa7.63□□□□□ -1.19
HPS4-209ENST00000466781 BRCA1P38398 1863 aaKnown RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 NPIPB6E9PJ23 425 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 CHST1O43916 411 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZNF324O75467 553 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 LIFP15018 202 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 MEOX2P50222 304 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms