RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
DNMT3A-208ENST00000466601 AK3Q9UIJ7 227 aa11.81□□□□□ -0.52
DNMT3A-208ENST00000466601 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 ORC5O43913 435 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 COX7A1P24310 79 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 SSTR5P35346 364 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 GDNFP39905 211 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 SPCS2Q15005 226 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 PNKDQ8N490 385 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 RFESDQ8TAC1 157 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 CHMP1AQ9HD42 196 aaPredicted RBP11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 SOX21Q9Y651 276 aaPredicted RBP11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 CEPT1Q9Y6K0 416 aa11.8□□□□□ -0.52
DNMT3A-208ENST00000466601 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 C15orf65H3BRN8 121 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 NPFFO15130 113 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 SCGNO76038 276 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 NAPSAO96009 420 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 IFNA2P01563 188 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 GNB3P16520 340 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 RCC1P18754 421 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 C6orf183Q5T699 404 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 OLFML2AQ68BL7 652 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 TRAT1Q6PIZ9 186 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 BAIAP2L2Q6UXY1 529 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 PHF21AQ96BD5 680 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 ISOC1Q96CN7 298 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 KIRREL1Q96J84 757 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 SLC6A7Q99884 636 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 CMSS1Q9BQ75 279 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 HDHD3Q9BSH5 251 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 SUCNR1Q9BXA5 334 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 KCNIP1Q9NZI2 227 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 KCNK7Q9Y2U2 307 aa11.79□□□□□ -0.52
DNMT3A-208ENST00000466601 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 A0A075B6Q4 140 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 MFNGO00587 321 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 ZNF182P17025 639 aaPredicted RBP11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 NFYBP25208 207 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 LTC4SQ16873 150 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 MIDNQ504T8 468 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 UBALD1Q8TB05 177 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 RAB9BQ9NP90 201 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
DNMT3A-208ENST00000466601 TRBV6-6A0A0A6YYG2 114 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 IGHV2-26A0A0B4J1V2 119 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 A0A0U1RQK1 487 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 MEIOCA2RUB1 952 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 FAM172BPA6NC97 362 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 CCDC160A6NGH7 325 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 SERPINE3A8MV23 424 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 H3BMQ9 156 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 SPINT2O43291 252 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ARG1P05089 322 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 CD3GP09693 182 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 CD34P28906 385 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 SAA4P35542 130 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 LGALS4P56470 323 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 RIPPLY3P57055 190 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 MRPS15P82914 257 aaKnown RBP11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 DEFB112Q30KQ8 113 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 CDNFQ49AH0 187 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNF880Q6PDB4 577 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNF554Q86TJ5 538 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 PRR18Q8N4B5 295 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 SAMD12Q8N8I0 201 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 SETD6Q8TBK2 473 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNF418Q8TF45 676 aaPredicted RBP11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 AP3S1Q92572 193 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNF48Q96MX3 618 aaPredicted RBP11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 CLEC7AQ9BXN2 247 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 ABCG5Q9H222 651 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 TAF9BQ9HBM6 251 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 C12orf4Q9NQ89 552 aa11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.53
DNMT3A-208ENST00000466601 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms