RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 P0C880 135 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 COL8A2P25067 703 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 S100A5P33763 92 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 HSPA13P48723 471 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 MRPS15P82914 257 aaKnown RBP2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 GNA13Q14344 377 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 PAFAH1B3Q15102 231 aaKnown RBP2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 DEFB134Q4QY38 66 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 LYZL2Q7Z4W2 148 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 MARCH3Q86UD3 253 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 BOD1L2Q8IYS8 172 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 LRRC45Q96CN5 670 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 CMBLQ96DG6 245 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 MED10Q9BTT4 135 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 UGT2B28Q9BY64 529 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 NDEL1Q9GZM8 345 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 GABARAPL1Q9H0R8 117 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 MAP3K5Q99683 1374 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 A0A1W2PNN7 141 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 SLC31A1O15431 190 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZW10O43264 779 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 ADAP1O75689 374 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 SOX14O95416 240 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 AHSA1O95433 338 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 RD3LP0DJH9 198 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 PSKH1P11801 424 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 INPP1P49441 399 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 RPL14P50914 215 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 EXOC3L4Q17RC7 722 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 TMEM156Q8N614 296 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 FER1L6-AS1Q8NA97 138 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 GATD1Q8NB37 220 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 OR5AK3PQ8NH89 298 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 DNAJB3Q8WWF6 145 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 ANP32BQ92688 251 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 MAL2Q969L2 176 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF251Q9BRH9 671 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 CCDC94Q9BW85 323 aaPredicted RBP2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 SPZ1Q9BXG8 430 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 LRRC19Q9H756 370 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF391Q9UJN7 358 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 PSMD13Q9UNM6 376 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 NACADO15069 1562 aa2.17□□□□□ -2.06
CDC42BPA-211ENST00000466538 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 SHROOM3Q8TF72 1996 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 OR5H14A6NHG9 310 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 GGTLC3B5MD39 225 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 F8VZ95 297 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 AQP9O43315 295 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 FGF16O43320 207 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 SYNGR1O43759 233 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 SYNGR2O43760 224 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGHMP01871 453 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 LIMS3P0CW19 117 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 LIMS4P0CW20 117 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 CGB3P0DN86 165 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 CGB7P0DN87 165 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 NEFHP12036 1026 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 GABRA1P14867 456 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 KDELR2P33947 212 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF141Q15928 474 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 TIMM23BQ5SRD1 257 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 CRLF3Q8IUI8 442 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 MUC15Q8N387 334 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 EIF4E3Q8N5X7 224 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 OTUB2Q96DC9 234 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 PSTPIP2Q9H939 334 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 ASCL3Q9NQ33 180 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 NKIRAS1Q9NYS0 192 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 MCTS1Q9ULC4 181 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF443Q9Y2A4 671 aaPredicted RBP2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 TBL2Q9Y4P3 447 aaKnown RBP2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 SHANK1Q9Y566 2161 aa2.16□□□□□ -2.06
CDC42BPA-211ENST00000466538 A0A0B4J2C4 111 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 C8orf87E5RJ46 101 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 H3BMM0 161 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 PSCAO43653 123 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 CYTH3O43739 400 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 SYT1P21579 422 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 CRABP2P29373 138 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 RCVRNP35243 200 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 TGFBR2P37173 567 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 CDC34P49427 236 aaPredicted RBP2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 DHRS2Q13268 280 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 SLC9A3R2Q15599 337 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 RGS21Q2M5E4 152 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 PYCR3Q53H96 274 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 PYDC2Q56P42 97 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 COQ5Q5HYK3 327 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 C8orf74Q6P047 294 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 CYHR1Q6ZMK1 362 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 PLCZ1Q86YW0 608 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 DYNC2LI1Q8TCX1 351 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 UBE2WQ96B02 151 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 REEP6Q96HR9 211 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 TRIB3Q96RU7 358 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms