RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SOD3P08294 240 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF735P0CB33 412 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 AKAIN1P0CW23 69 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PPIAL4FP0DN26 164 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CGB3P0DN86 165 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CGB7P0DN87 165 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 EGR2P11161 476 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF44P15621 663 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 GZMHP20718 246 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 GCSHP23434 173 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 RFX2P48378 723 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 BTG1P62324 171 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CCL8P80075 99 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CDK10Q15131 360 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 MICBQ29980 383 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PLA1AQ53H76 456 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 SPRNQ5BIV9 151 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF57Q68EA5 555 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 STUMQ69YW2 141 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 STEAP1BQ6NZ63 245 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 TRAT1Q6PIZ9 186 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 DHRS11Q6UWP2 260 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 C17orf107Q6ZR85 190 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 DCDC5Q6ZRR9 648 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 OVCH2Q7RTZ1 564 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 C6orf201Q7Z4U5 140 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 TRAPPC6BQ86SZ2 158 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ARRDC1Q8N5I2 433 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 SUMF2Q8NBJ7 301 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 OR5AP2Q8NGF4 316 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 GIMAP1Q8WWP7 306 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CORO2AQ92828 525 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 MED30Q96HR3 178 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 LURAP1Q96LR2 239 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF488Q96MN9 340 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 VRK1Q99986 396 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 SLC25A21Q9BQT8 299 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 MARVELD1Q9BSK0 173 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 SHARPINQ9H0F6 387 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 C11orf54Q9H0W9 315 aaPredicted RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZNF665Q9H7R5 613 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 ZMAT3Q9HA38 289 aaKnown RBP4.56□□□□□ -1.68
VPS41-211ENST00000466017 TMEM165Q9HC07 324 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 Q9N2K0 584 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 UFSP2Q9NUQ7 469 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 TMEM140Q9NV12 185 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 AK3Q9UIJ7 227 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 PPIAL4AQ9Y536 164 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 CACNG2Q9Y698 323 aa4.56□□□□□ -1.68
VPS41-211ENST00000466017 IGKV1D-17A0A075B6S4 117 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 KIR2DS1A0A191URI9 304 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 FAM240BA0A1B0GVZ2 78 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 hCG_1807616A0A1W2PRN6 198 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ZNF736B4DX44 427 aaPredicted RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 DISC1C4P0D8 188 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 SIGLEC5O15389 551 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 RP2O75695 350 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 RAB3DO95716 219 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 CLDN1O95832 211 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 FCER2P06734 321 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 FCGR3AP08637 254 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 PTHLHP12272 177 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 COX6B1P14854 86 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 EGR1P18146 543 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 KIR2DS4P43632 304 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 EFNA4P52798 201 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 SNU13P55769 128 aaKnown RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 UCP3P55916 312 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 TAS2R46P59540 309 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 MRPS15P82914 257 aaKnown RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 KIR2DS1Q14954 304 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 HFEQ30201 348 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 TMEM155Q4W5P6 130 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 PAN3Q58A45 887 aaKnown RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 LY6G6FQ5SQ64 297 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ATAD3CQ5T2N8 411 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 RSBN1Q5VWQ0 802 aaPredicted RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 CCBE1Q6UXH8 406 aaPredicted RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 ZNF497Q6ZNH5 498 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 MOB1BQ7L9L4 216 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 SLC36A1Q7Z2H8 476 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 CENPSQ8N2Z9 138 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 CD177Q8N6Q3 437 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 BEST4Q8NFU0 473 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 OR4K15Q8NH41 348 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 NUDCD2Q8WVJ2 157 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 SCGB3A2Q96PL1 93 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 WDR13Q9H1Z4 485 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 DPAGT1Q9H3H5 408 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 LINC00574Q9H8X3 128 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ZNF286AQ9HBT8 521 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 RAB9BQ9NP90 201 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 C12orf4Q9NQ89 552 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 IFT46Q9NQC8 304 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ZNF701Q9NV72 531 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms