RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LINC00312Q9Y6C7 94 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
COL6A1-202ENST00000463060 NOTCH2Q04721 2471 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 FAM157AC9JC47 383 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 NPIPB11E5RHQ5 1161 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-202ENST00000463060 CD74P04233 296 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 DLX6P56179 175 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ACTBP60709 375 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 GNB2P62879 340 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ACTG1P63261 375 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ESCO2Q56NI9 601 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 OR52W1Q6IF63 320 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 C11orf42Q8N5U0 333 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF565Q8N9K5 539 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 BEST4Q8NFU0 473 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 RAB39BQ96DA2 213 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 DMRTB1Q96MA1 342 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 REG4Q9BYZ8 158 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 TAF9BQ9HBM6 251 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 TAS2R3Q9NYW6 316 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 LPAR3Q9UBY5 353 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 OPN4Q9UHM6 478 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 MGAT4AQ9UM21 535 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 UBE2J1Q9Y385 318 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-202ENST00000463060 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.52
COL6A1-202ENST00000463060 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 A0A1W2PQ09 198 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 hADV38S2A0JD32 116 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 C12orf77C9JDV5 145 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 PLA2G10O15496 165 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 SCTP09683 121 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 GSTT2P0CG29 244 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF273Q14593 569 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 CD276Q5ZPR3 534 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 STEAP3Q658P3 488 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 TRAT1Q6PIZ9 186 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 OR5AP2Q8NGF4 316 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 H1FXQ92522 213 aaKnown RBP11.82□□□□□ -0.52
COL6A1-202ENST00000463060 Q96MF0 132 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 IFT46Q9NQC8 304 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 ANXA10Q9UJ72 324 aa11.82□□□□□ -0.52
COL6A1-202ENST00000463060 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 CCDC168Q8NDH2 2452 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 CSMD1Q96PZ7 3565 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 LOC105371242A0A075B767 164 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 KBTBD11-OT1A0A1B0GTJ5 212 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 MEX3AA1L020 520 aaKnown RBP11.81□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-202ENST00000463060 FABP7O15540 132 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 HBZP02008 142 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 CD3DP04234 171 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 FCER2P06734 321 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 CSF1P09603 554 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 HLA-DRB3P79483 266 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 C6orf183Q5T699 404 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 OVCH2Q7RTZ1 564 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 OR4A4PQ8NGN8 299 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 MYO9AB2RTY4 2548 aa11.81□□□□□ -0.52
COL6A1-202ENST00000463060 PPIAL4CA0A0B4J2A2 164 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 KIR2DS1A0A191URI9 304 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF736B4DX44 427 aaPredicted RBP11.8□□□□□ -0.52
COL6A1-202ENST00000463060 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 F2RL2O00254 374 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 FOXH1O75593 365 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 DIRAS3O95661 229 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 HEXAP06865 529 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF735P0CB33 412 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 PPIAL4GP0DN37 164 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TBPP20226 339 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 HLA-DMAP28067 261 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 SSTR5P35346 364 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 GLP1RP43220 463 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 KIR2DS4P43632 304 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TAS2R19P59542 299 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 KIR2DS1Q14954 304 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 VAX1Q5SQQ9 334 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TRIQKQ629K1 86 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TOMM5Q8N4H5 51 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 OR1L1Q8NH94 360 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms