RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 LINC00596Q86U02 117 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 LURAP1LQ8IV03 231 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 MKXQ8IYA7 352 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 H1FOOQ8IZA3 346 aaPredicted RBP6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CYB561D1Q8N8Q1 229 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 OR10G4Q8NGN3 311 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 Q8WTZ3 238 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ABHD3Q8WU67 409 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GPR146Q96CH1 333 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 RBMXL1Q96E39 390 aaKnown RBP6.32□□□□□ -1.4
SREBF2-204ENST00000462539 TVP23CQ96ET8 276 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GUCD1Q96NT3 240 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 GPHA2Q96T91 129 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 RNF115Q9Y4L5 304 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 MMP24Q9Y5R2 645 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ATP23Q9Y6H3 246 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 WSB1Q9Y6I7 421 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 SHANK1Q9Y566 2161 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CDH23Q9H251 3354 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 CEP290O15078 2479 aa6.32□□□□□ -1.4
SREBF2-204ENST00000462539 ESPL1Q14674 2120 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 CXorf65A6NEN9 183 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 IFITM10A6NMD0 228 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 KIAA1324LA8MWY0 1029 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 NPIPB11E5RHQ5 1161 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 TRAPPC2LH3BP13 241 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 DEGS1O15121 323 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 SYNGR1O43759 233 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 CHST1O43916 411 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 PGLYRP1O75594 196 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 TRAPPC6AO75865 159 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 IGHV2-70P01814 119 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 OTX2P32243 289 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 RPS10P46783 165 aaKnown RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 HAAOP46952 286 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 RAB2AP61019 212 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 RPS18P62269 152 aaKnown RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 RPL23AP62750 156 aaKnown RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 DLK1P80370 383 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 TLE4Q04727 773 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 TMEM267Q0VDI3 215 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ELOBQ15370 118 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF674Q2M3X9 581 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF324BQ6AW86 544 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF343Q6P1L6 599 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 SLC35E3Q7Z769 313 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF429Q86V71 674 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 STX12Q86Y82 276 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 CMTM1Q8IZ96 169 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF610Q8N9Z0 462 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 NEK7Q8TDX7 302 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 APOBEC3DQ96AK3 386 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 RIMS4Q9H426 269 aaPredicted RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 OPA3Q9H6K4 179 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 MTCH1Q9NZJ7 389 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 MIOXQ9UGB7 285 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 NOSIPQ9Y314 301 aaKnown RBP6.31□□□□□ -1.4
SREBF2-204ENST00000462539 CABIN1Q9Y6J0 2220 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 DOCK10Q96BY6 2186 aa6.31□□□□□ -1.4
SREBF2-204ENST00000462539 CHD3Q12873 2000 aaKnown RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 PIGBOS1A0A0B4J2F0 54 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CCDC163A0A0D9SF12 145 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 A0A1B0GU03 582 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 LRP5LA4QPB2 252 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF503-AS2A6NEH8 195 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 B4E171 279 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 SLC33A1O00400 549 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 HSPB6O14558 160 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 ZNHIT1O43257 154 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TNFSF12O43508 249 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 IFNA5P01569 189 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CFIP05156 583 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TDGF1P13385 188 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 F2RP25116 425 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 S100GP29377 79 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TSPAN7P41732 249 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CDX1P47902 265 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 GLIPR1P48060 266 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 DUSP3P51452 185 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CEBPGP53567 150 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 PEAR1Q5VY43 1037 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 FAM90A2PQ658T7 463 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 HAPLN4Q86UW8 402 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 ZNF525Q8N782 197 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TMEM217Q8N7C4 229 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 OR13D1Q8NGV5 346 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CT55Q8WUE5 264 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 EDARADDQ8WWZ3 215 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 OR5P3Q8WZ94 311 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 LSM10Q969L4 123 aaKnown RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 CDX2Q99626 313 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 NIPSNAP3BQ9BS92 247 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 PSMG3Q9BT73 122 aaPredicted RBP6.3□□□□□ -1.4
SREBF2-204ENST00000462539 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
SREBF2-204ENST00000462539 TOLLIPQ9H0E2 274 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms